DBGSA

Package: DBGSA
Type: Package
Title: methods of distance-based gene set functional enrichment
analysis.
Version: 1.2
Date: 2011-12-29
Author: Li Jin, Huang Meilin
Maintainer: Li Jin <lijin@hrbmu.edu.cn>
Data: 2011-05-17
Description: This package provides methods and examples to support a
method of Gene Set Analysis (GSA). DBGSA is a novel
distance-based gene set enrichment analysis method. We consider
that, the distance between 2 groups with different phenotype by
focusing on the gene expression should be larger, if a certain
gene functional set was significantly associated with a
particular phenotype.
License: GPL-3
Depends: R (>= 2.12.2), fdrtool (>= 1.2.6)
BioViews: bioinformatics, Microarray
Collate: avelinkdis.R centdis.R distable.R randdis.R valuep.R
functionall.R
lazy-loading: yes
Packaged: 2012-01-16 03:26:10 UTC; Lemon
Repository: CRAN
Date/Publication: 2012-01-16 07:32:40

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'DBGSA' ...
** package 'DBGSA' successfully unpacked and MD5 sums checked
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'DBGSA'
    finding HTML links ... done
    DBGSA-package                           html  
    afExp                                   html  
    avelinkdis                              html  
    b1                                      html  
    centdis                                 html  
    distable                                html  
    distance                                html  
    functionall                             html  
    rand                                    html  
    randdis                                 html  
    valuep                                  html  
** building package indices
** testing if installed package can be loaded
* DONE (DBGSA)
Making 'packages.html' ... done