DNAtools

Package: DNAtools
Type: Package
Title: Tools for analysing forensic genetic DNA data
Version: 0.1-21
Date: 2014-09-03
Author: Torben Tvedebrink <tvede@math.aau.dk> and James Curran <j.curran@auckland.ac.nz>. Mikkel Meyer Andersen <mikl@math.aau.dk> assisted on the multicore/CPU implementation.
Maintainer: Torben Tvedebrink <tvede@math.aau.dk>
Description: Computationally efficient tools for comparing all pairs of profiles in a DNA database. The expectation and covariance of the summary statistic
is implemented for fast computing. Routines for estimating proportions of close related individuals are available. The use of wildcards (also
called F-designation) is implemented. Dedicated functions ease plotting the results.
License: GPL (>= 2)
Depends: R (>= 2.10.0), Rsolnp, multicool
Imports: Rcpp (>= 0.11.2)
LinkingTo: Rcpp
Packaged: 2014-09-03 09:25:02 UTC; tvede
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2014-09-03 18:07:11

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'DNAtools' ...
** package 'DNAtools' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c DNTRare.cpp -o DNTRare.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c mcompare.cpp -o mcompare.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c prob.cpp -o prob.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c profile.cpp -o profile.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c rcpp_hello_world.cpp -o rcpp_hello_world.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o DNAtools.so DNTRare.o RcppExports.o mcompare.o prob.o profile.o rcpp_hello_world.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/DNAtools/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'DNAtools'
    finding HTML links ... done
    DNAtools-package                        html  
    dbExample                               html  
    dbcollapse                              html  
    dbcompare                               html  
    dbsimulate                              html  
    estimatePD                              html  
    freqEst                                 html  
    noa                                     html  
    noaTabs                                 html  
    pContrib                                html  
    pContrib.locus                          html  
    plot.dbOptim                            html  
    plot.dbcompare                          html  
    print.dbOptim                           html  
    print.dbcompare                         html  
    rarity                                  html  
    rarityVar                               html  
    rcpp_hello_world                        html  
    relatedness                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (DNAtools)
Making 'packages.html' ... done