DendSer

Package: DendSer
Version: 1.0.1
Date: 2013-09-09
Author: Catherine B. Hurley and Denise Earle
Maintainer: Catherine Hurley <catherine.hurley@nuim.ie>
Title: Dendrogram seriation: ordering for visualisation
Description: Re-arranges a dendrogram to optimize visualisation-based cost functions
Depends: gclus, seriation
License: GPL-2
Packaged: 2013-09-09 18:11:01 UTC; catherin
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2013-09-09 21:15:20

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'DendSer' ...
** package 'DendSer' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c carct.c -o carct.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c cbar.c -o cbar.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c clpl.c -o clpl.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c cpl.c -o cpl.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o DendSer.so carct.o cbar.o clpl.o cpl.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/DendSer/libs
** R
** demo
** preparing package for lazy loading
Note: no visible binding for global variable 'costED' 
Note: no visible binding for global variable 'costLS' 
Note: no visible global function definition for 'leafSort' 
Note: no visible binding for global variable 'costLS' 
Note: no visible binding for global variable 'costBAR' 
Note: no visible binding for global variable 'costPL' 
Note: no visible binding for global variable 'costLPL' 
Note: no visible binding for global variable 'costARc' 
Note: no visible binding for global variable 'costED' 
Note: no visible global function definition for 'defaultcostArg' 
Note: no visible binding for global variable 't01' 
Warning in seriation::set_criterion_method("dist", "BAR", criterion_method_dist_BAR,  :
  Entry with name BAR already exists! Modifying entry.
** help
*** installing help indices
  converting help for package 'DendSer'
    finding HTML links ... done
    DendSer                                 html  
    costARc                                 html  
    crit2cost                               html  
    dser                                    html  
    plotAsColor                             html  
** building package indices
** testing if installed package can be loaded
* DONE (DendSer)
Making 'packages.html' ... done