DiffCorr

Package: DiffCorr
Type: Package
Title: Analyzing and Visualizing Differential Correlation Networks in
Biological Data
Version: 0.4.1
Date: 2015-03-31
Author: Atsushi Fukushima, Kozo Nishida
Maintainer: Atsushi Fukushima <atsushi.fukushima@riken.jp>
Depends: pcaMethods, igraph, fdrtool, multtest
Description: A method for identifying pattern changes between 2 experimental
conditions in correlation networks (e.g., gene co-expression networks),
which builds on a commonly used association measure, such as Pearson's
correlation coefficient. This package includes functions to calculate
correlation matrices for high-dimensional dataset and to test
differential correlation, which means the changes in the correlation
relationship among variables (e.g., genes and metabolites) between 2
experimental conditions.
License: GPL (> 3)
Packaged: 2015-03-31 08:49:09 UTC; fuku
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-04-02 00:07:09

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'DiffCorr' ...
** package 'DiffCorr' successfully unpacked and MD5 sums checked
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'DiffCorr'
    finding HTML links ... done
    AraMetLeaves                            html  
    AraMetRoots                             html  
    DiffCorr                                html  
    cluster.molecule                        html  
    comp.2.cc.fdr                           html  
    compcorr                                html  
    cor.dist                                html  
    cor2.test                               html  
    generate_g                              html  
    get.eigen.molecule                      html  
    get.eigen.molecule.graph                html  
    get.lfdr                                html  
    get.min.max                             html  
    plotClusterMolecules                    html  
    plotDiffCorrGroup                       html  
    scalingMethods                          html  
    uncent.cor2dist                         html  
    uncent.cordist                          html  
    write.modules                           html  
** building package indices
** testing if installed package can be loaded
* DONE (DiffCorr)
Making 'packages.html' ... done