EasyStrata

Package: EasyStrata
Type: Package
Title: Evaluation of stratified genome-wide association meta-analysis
results
Version: 8.6
Date: 2014-06-20
Author: Thomas Winkler
Maintainer: Thomas Winkler <thomas.winkler@klinik.uni-regensburg.de>
Description: This is a pipelining tool that facilitates
evaluation and visualisation of stratified genome-wide
association meta-analyses (GWAMAs) results data. It
provides (i) statistical methods to test and to account
for between-strata difference and to clump genome-wide
results into independent loci and (ii) extended graphical
features (e.g., Manhattan, Miami and QQ plots) tailored
for stratified GWAMA results.
License: GPL-3
LazyLoad: yes
Depends: methods, Cairo, plotrix
Collate: clsEqcReader4.r clsRCD7.r clsGWADATA45.r clsEASYMERGE.r
fnEasyPLOT10.r clsREPORT9.r clsMERGE11.r clsSPLOT21.r
clsADDCOL11.r clsADJUSTALLELES15.r clsANNOTATE8.r
clsBONFERRONI3.r clsCALCPDIFF6.r clsCALCPHET3.r clsCALCULATE3.r
clsCLEAN5.r clsCLUMP5.r clsCRITERION6.r clsEDITCOL.r
clsEVALSTAT7.r clsEXTRACTSNPS3.r clsFDR3.r clsFILTER6.r
clsGC5.r clsGETCOLS.r clsGETNUM2.r clsINDEP7.r clsJOINTTEST3.r
clsMERGEEASYIN4.r clsMETAANALYSIS5.r clsMHPLOT15.r
clsMIAMIPLOT15.r clsQQPLOT17.r clsREMOVECOL.r clsRENAMECOL2.r
clsRPLOT18.r clsSTRSPLITCOL.r clsWRITE7.r EasyX86.r
Packaged: 2014-06-23 14:07:23 UTC; root
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-06-24 01:04:13

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'EasyStrata' ...
** package 'EasyStrata' successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'EasyStrata'
    finding HTML links ... done
    EasyStrata                              html  
** building package indices
** testing if installed package can be loaded
* DONE (EasyStrata)
Making 'packages.html' ... done