FNN

Package: FNN
Version: 1.1
Date: 2013-07-30
Title: Fast Nearest Neighbor Search Algorithms and Applications
Author: Alina Beygelzimer, Sham Kakadet and John Langford (cover tree library),
Sunil Arya and David Mount (ANN library for the kd-tree approach), Shengqiao Li
Copyright: ANN Copyright (c) 1997-2010 University of Maryland and Sunil
Arya and David Mount. All Rights Reserved.
Maintainer: Shengqiao Li <lishengqiao@yahoo.com>
Depends: R (>= 2.8.0)
Suggests: chemometrics, mvtnorm
Description: Cover-tree and kd-tree fast k-nearest neighbor search algorithms and related applications
including KNN classification, regression and information measures are implemented.
License: GPL (>= 2.1)
Packaged: 2013-07-31 15:25:40 UTC; lis2
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2013-07-31 21:31:17

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'FNN' ...
** package 'FNN' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c ANN.cpp -o ANN.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c KNN_ANN.cpp -o KNN_ANN.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c KNN_correlation_distance.cpp -o KNN_correlation_distance.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c KNN_cover_test.cpp -o KNN_cover_test.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c KNN_cover_tree.cpp -o KNN_cover_tree.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c KNN_mutual_information.cpp -o KNN_mutual_information.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c bd_fix_rad_search.cpp -o bd_fix_rad_search.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c bd_pr_search.cpp -o bd_pr_search.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c bd_search.cpp -o bd_search.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c bd_tree.cpp -o bd_tree.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c brute.cpp -o brute.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c kd_dump.cpp -o kd_dump.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c kd_fix_rad_search.cpp -o kd_fix_rad_search.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c kd_pr_search.cpp -o kd_pr_search.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c kd_search.cpp -o kd_search.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c kd_split.cpp -o kd_split.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c kd_tree.cpp -o kd_tree.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c kd_util.cpp -o kd_util.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c label_point.cpp -o label_point.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include    -fpic  -g -O2  -c perf.cpp -o perf.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o FNN.so ANN.o KNN_ANN.o KNN_correlation_distance.o KNN_cover_test.o KNN_cover_tree.o KNN_mutual_information.o bd_fix_rad_search.o bd_pr_search.o bd_search.o bd_tree.o brute.o kd_dump.o kd_fix_rad_search.o kd_pr_search.o kd_search.o kd_split.o kd_tree.o kd_util.o label_point.o perf.o -L/home/ddbj/local/lib64/R/lib -lR
rm -f *.o core
installing to /home/ddbj/local/lib64/R/library/FNN/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'FNN'
    finding HTML links ... done
    KL.dist                                 html  
    KL.divergence                           html  
    crossentropy                            html  
    entropy                                 html  
    get.knn                                 html  
    knn                                     html  
    knn.cv                                  html  
    knn.dist                                html  
    knn.index                               html  
    knn.reg                                 html  
    mutual_information                      html  
    ownn                                    html  
    print.knnRegCV                          html  
** building package indices
** testing if installed package can be loaded
* DONE (FNN)
Making 'packages.html' ... done