GSSE

Package: GSSE
Type: Package
Title: Genotype-Specific Survival Estimation
Description: We propose a fully efficient sieve maximum likelihood method to estimate genotype-specific distribution of time-to-event outcomes under a nonparametric model. We can handle missing genotypes in pedigrees. We estimate the time-dependent hazard ratio between two genetic mutation groups using B-splines, while applying nonparametric maximum likelihood estimation to the reference baseline hazard function. The estimators are calculated via an expectation-maximization algorithm.
Version: 0.1
Date: 2015-10-17
Author: Baosheng Liang, Yuanjia Wang and Donglin Zeng
Maintainer: Baosheng Liang <liangbsunc@gmail.com>
Depends: R (>= 3.0.1)
Suggests: MASS
Imports: Iso (>= 0.0-17), splines, stats, zoo (>= 1.7-12)
License: GPL (>= 2)
LazyLoad: yes
NeedsCompilation: no
Packaged: 2015-10-20 01:00:51 UTC; BLiang
Repository: CRAN
Date/Publication: 2015-10-20 08:06:35

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'GSSE' ...
** package 'GSSE' successfully unpacked and MD5 sums checked
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'GSSE'
    finding HTML links ... done
    EM_PAVA_Func                            html  
    GSSE-package                            html  
    Permutation_Test                        html  
    Sieve_NPMLE_Bootstrap                   html  
    Sieve_NPMLE_Switch                      html  
    Simulated_data                          html  
    p0G_Func                                html  
    p0G_data                                html  
    test_stat                               html  
** building package indices
** testing if installed package can be loaded
* DONE (GSSE)
Making 'packages.html' ... done