GiANT

Package: GiANT
Type: Package
Title: Gene Set Uncertainty in Enrichment Analysis
Version: 1.2
Date: 2015-12-28
Author: Florian Schmid, Christoph Müssel, Johann M. Kraus, Hans A. Kestler
Maintainer: Hans Kestler <hans.kestler@uni-ulm.de>
Description: Toolbox for various enrichment analysis methods and quantification of uncertainty of gene sets.
License: Artistic-2.0
LazyLoad: yes
Imports: parallel, graphics, grDevices, methods, stats, utils
Suggests: GlobalAncova, globaltest, fdrtool, st, limma, DESeq
Encoding: UTF-8
NeedsCompilation: no
Packaged: 2015-12-28 14:11:28 UTC; schmid
Repository: CRAN
Date/Publication: 2015-12-29 07:53:08

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'GiANT' ...
** package 'GiANT' successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'GiANT'
    finding HTML links ... done
    GiANT-package                           html  
    createSummaryTable                      html  
    evaluateGeneSetUncertainty              html  
    filterGenesets                          html  
    geneSetAnalysis                         html  
    globalAnalysis                          html  
    gls                                     html  
    gsAnalysis                              html  
    gss                                     html  
    hist                                    html  
    mergeProbesForGenes                     html  
    parseGmt                                html  
    plot                                    html  
    plotOverrepresentation                  html  
Rd warning: /tmp/RtmpziQZRs/R.INSTALL200c6d97665f/GiANT/man/plotOverrepresentation.Rd:36: missing file link 'vennDiagram'
    predefinedAnalyses                      html  
    preprocessGeneSets                      html  
    significance                            html  
    summary                                 html  
    transformation                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (GiANT)
Making 'packages.html' ... done