Gmisc

Package: Gmisc
Version: 1.3.1
Date: 2016-02-07
Title: Descriptive Statistics, Transition Plots, and More
Author: Max Gordon <max@gforge.se>
Maintainer: Max Gordon <max@gforge.se>
Description: Tools for making the descriptive "Table 1" used in medical
articles, a transition plot for showing changes between categories, a method for
variable selection based on the SVD, Bézier lines with arrows complementing the
ones in the 'grid' package, and more.
License: GPL (>= 3)
URL: http://gforge.se
BugReports: https://github.com/gforge/Gmisc/issues
Biarch: yes
Depends: R (>= 3.2.0), Rcpp (>= 0.11.4), htmlTable (>= 1.1)
Imports: grid, grDevices, graphics, lattice, Hmisc, forestplot, abind,
methods, knitr, magrittr, rmarkdown, XML, utils, stats
Suggests: testthat
Encoding: UTF-8
NeedsCompilation: no
VignetteBuilder: knitr
LinkingTo: Rcpp
RoxygenNote: 5.0.1
Packaged: 2016-02-07 20:23:17 UTC; Max
Repository: CRAN
Date/Publication: 2016-02-07 23:56:43

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'Gmisc' ...
** package 'Gmisc' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c Gmisc_lines.cpp -o Gmisc_lines.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c bezierArrowFn.cpp -o bezierArrowFn.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c gnrlBezier.cpp -o gnrlBezier.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o Gmisc.so Gmisc_lines.o RcppExports.o bezierArrowFn.o gnrlBezier.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/Gmisc/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'Gmisc'
    finding HTML links ... done
    Gmisc-deprecated                        html  
    Gmisc-package                           html  
    Transition-class                        html  
    bezierArrowGradient                     html  
Rd warning: /tmp/RtmpAsr4cI/R.INSTALL214d55109f18/Gmisc/man/bezierArrowGradient.Rd:77: missing file link 'gList'
    bezierArrowSmpl                         html  
Rd warning: /tmp/RtmpAsr4cI/R.INSTALL214d55109f18/Gmisc/man/bezierArrowSmpl.Rd:65: missing file link 'bezierGrob'
    calculateLinesAndArrow                  html  
    copyAllNewAttributes                    html  
    describeFactors                         html  
    finding level-2 HTML links ... done

    describeMean                            html  
    describeMedian                          html  
    describeProp                            html  
    docx_document                           html  
    fastDoCall                              html  
    figCapNo                                html  
    figCapNoLast                            html  
    figCapNoNext                            html  
    getAbsoluteWidth                        html  
    getBezierAdj4Arrw                       html  
    getDescriptionStatsBy                   html  
    getGridVal                              html  
    getPval                                 html  
    getSvdMostInfluential                   html  
    getVectorAngle                          html  
    gnrlBezierPoints                        html  
    htmlTable_latex                         html  
    insertRowAndKeepAttr                    html  
    isHorizontal                            html  
    mergeDesc                               html  
Rd warning: /tmp/RtmpAsr4cI/R.INSTALL214d55109f18/Gmisc/man/mergeDesc.Rd:36: missing file link 'rownames'
    mergeLists                              html  
    mergeLists_internal                     html  
    prCaptionFix                            html  
    prConvertShowMissing                    html  
    prDescGetAndValidateDefaultRef          html  
    prDescGetMissing                        html  
    prFtpHeaderStyle                        html  
    prFtpOtherChanges                       html  
    prFtpOtherRemoval                       html  
    prFtpScriptRemoval                      html  
    prGetStatistics                         html  
    prGetTextGrobCex                        html  
    prGridPlotTitle                         html  
Rd warning: /tmp/RtmpAsr4cI/R.INSTALL214d55109f18/Gmisc/man/prGridPlotTitle.Rd:11: missing file link 'textGrob'
    prPasteVec                              html  
    prPushMarginViewport                    html  
    prSetMaxWidth                           html  
    prTcMatchClr                            html  
    prTcPlotArrows                          html  
    prTcPlotBoxColumn                       html  
    prTcValidateAndPrepClr                  html  
    prTpGetBoxPositions                     html  
    prTpGetBoxPropClr                       html  
    prTpGetBoxSizedTextGrob                 html  
    prTpGetColors                           html  
Rd warning: /tmp/RtmpAsr4cI/R.INSTALL214d55109f18/Gmisc/man/prTpGetColors.Rd:11: missing file link 'colorRampPalette'
    prTpPlotArrows                          html  
    prTpPlotBox                             html  
    prTpPlotBoxes                           html  
Rd warning: /tmp/RtmpAsr4cI/R.INSTALL214d55109f18/Gmisc/man/prTpPlotBoxes.Rd:83: missing file link 'bezierGrob'
    transitionPlot                          html  
Rd warning: /tmp/RtmpAsr4cI/R.INSTALL214d55109f18/Gmisc/man/transitionPlot.Rd:31: missing file link 'bezierGrob'
    validateAndConvertVectorInputs          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (Gmisc)
Making 'packages.html' ... done