HMP

Package: HMP
Type: Package
Title: Hypothesis Testing and Power Calculations for Comparing
Metagenomic Samples from HMP
Version: 1.4.3
Date: 2016-03-04
Author: Patricio S. La Rosa, Elena Deych, Berkley Shands, William D. Shannon
Maintainer: Berkley Shands <rpackages@biorankings.com>
Depends: R (>= 3.1.0), dirmult
Imports: MASS, gplots, doParallel, foreach, parallel
Description: Using Dirichlet-Multinomial distribution to provide several functions for formal hypothesis testing, power and sample size calculations for human microbiome experiments.
License: Apache License (== 2.0)
LazyData: yes
NeedsCompilation: no
Packaged: 2016-03-04 18:34:59 UTC; Berkley
Repository: CRAN
Date/Publication: 2016-03-04 22:42:08

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'HMP' ...
** package 'HMP' successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'HMP'
    finding HTML links ... done
    Barchart.data                           html  
    C.alpha.multinomial                     html  
    DM.MoM                                  html  
    Data.filter                             html  
    Dirichlet.multinomial                   html  
    HMP-internal                            html  
    HMP-package                             html  
    MC.Xdc.statistics                       html  
    MC.Xmc.statistics                       html  
    MC.Xmcupo.statistics                    html  
    MC.Xoc.statistics                       html  
    MC.Xsc.statistics                       html  
    MC.ZT.statistics                        html  
    Multinomial                             html  
    Xdc.sevsample                           html  
    Xmc.sevsample                           html  
    Xmcupo.effectsize                       html  
    Xmcupo.sevsample                        html  
    Xoc.sevsample                           html  
    Xsc.onesample                           html  
    formatDataSets                          html  
    kullbackLeiber                          html  
    pioest                                  html  
    saliva                                  html  
    throat                                  html  
    tongue                                  html  
    tonsils                                 html  
** building package indices
** testing if installed package can be loaded
* DONE (HMP)
Making 'packages.html' ... done