Last data update: 2014.03.03
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IPMpack
Package: IPMpack
Type: Package
Title: Builds and analyses Integral Projection Models (IPMs).
Version: 2.1
Date: 2012-7-4
Author: CJE Metcalf, SM McMahon, R Salguero-Gomez, E Jongejans, C Merow
Maintainer: Sean McMahon <ipmpack@gmail.com>
Description: IPMpack takes demographic vital rates and (optionally) environmental data to build integral projection models. A number of functional forms for growth and survival can be incorporated, as well as a range of reproductive strategies. The package also includes a suite of diagnostic routines, provides classic matrix model output (e.g., lambda, elasticities, sensitivities), and produces post-hoc metrics (e.g., passage time and life expectancy).
License: GPL
LazyLoad: yes
Depends: Matrix, MASS, nlme
Suggests: MCMCglmm, truncnorm, mvtnorm, methods, MCMCpack, fields
Packaged: 2014-03-16 15:30:30 UTC; seanmcmahon
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-03-17 03:08:17
Install log
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'IPMpack' ...
** package 'IPMpack' successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'IPMpack'
finding HTML links ... done
Hossfeld html
IPMmatrix-class html
IPMpack-internal html
IPMpack-package html
IPMpackNews html
R0Calc html
addPdfGrowthPic html
coerceGrowthObj html
convergeIPM html
convertIncrement html
dataIPMpackCryptantha.csv html
dataIPMpackHypericum.csv html
dataIPMpackHypericumCov.csv html
dataIPMpackSilwood.csv html
dataIPMpackSuccisa.csv html
dataIPMpackSuccisa2.csv html
diagnosticsPmatrix html
discreteTrans-class html
discreteTransInteger-class html
elas html
envMatrix-class html
fecObj-class html
fecObjInteger-class html
generateData html
growSurv html
growth-methods html
growth html
growthCum-methods html
growthCum html
growthModelComp html
growthObj-class html
growthObjDeclineVar-class html
growthObjHossfeld-class html
growthObjIncr-class html
growthObjIncrDeclineVar-class html
growthObjLogIncr-class html
growthObjLogIncrDeclineVar-class html
growthObjNegBin-class html
growthObjPois html
growthObjTruncIncr-class html
largeMatrixCalc html
logit html
makeClonalObj html
makeCompoundCmatrix html
makeCompoundFmatrix html
makeCompoundPmatrix html
makeDiscreteTrans html
makeDiscreteTransInteger html
makeEnvObj html
makeFecObj html
makeFecObjInteger html
makeGrowthObj html
makeGrowthObjHossfeld html
makeIPMCmatrix html
makeIPMFmatrix html
makeIPMPmatrix html
makeIPMmatrix html
makeIntegerFmatrix html
makeOffspringObj html
makeSurvObj html
meanLifeExpect html
passageTime html
picGrow html
picSurv html
plotGrowthModelComp html
predictFutureDistribution html
sampleIPM html
sampleIPMOutput html
sampleSequentialIPMs html
sampleVitalRateObj html
sensParams html
simulateCarlina html
sizeToAge html
stochGrowthRateManyCov html
stochGrowthRateSampleList html
stochPassageTime html
surv-methods html
surv html
survObj-class html
survObjOverDisp-class html
survivorship html
timeToSize html
varLifeExpect html
varPassageTime html
wrapHossfeld html
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (IPMpack)
Making 'packages.html' ... done
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