Last data update: 2014.03.03


Package: KCsmart
Type: Package
Title: Multi sample aCGH analysis package using kernel convolution
Version: 2.30.0
Date: 2009-11-26
Author: Jorma de Ronde, Christiaan Klijn, Arno Velds
Maintainer: Jorma de Ronde <>
Description: Multi sample aCGH analysis package using kernel
License: GPL-3
Depends: siggenes, multtest, KernSmooth
Imports: methods, BiocGenerics
Enhances: Biobase, CGHbase
Collate: 'AllClasses.R' 'access-methods.R' 'length-methods.R'
'plot-methods.R' 'show-methods.R' 'sort-methods.R'
'unlist-methods.R' 'write.table-methods.R' 'KC.R'
LazyLoad: yes
biocViews: CopyNumberVariation, Visualization, aCGH, Microarray
NeedsCompilation: no
Packaged: 2016-05-04 03:10:10 UTC; biocbuild

● BiocViews: CopyNumberVariation, Microarray, Visualization, aCGH
19 images, 23 functions, 3 datasets
● Reverse Depends: 0

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'KCsmart' ...
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for 'write.table' from package 'utils' in package 'KCsmart'
** help
*** installing help indices
  converting help for package 'KCsmart'
    finding HTML links ... done
    KCData-class                            html  
    KCsmart-package                         html  
    KcghData-class                          html  
    KcghDataMirror-class                    html  
    KcghDataSplit-class                     html  
    KcghDataSum-class                       html  
    calcSpm                                 html  
    calcSpmCollection                       html  
    compKc-class                            html  
    compKcSigRegions-class                  html  
    compareSpmCollection                    html  
    findSigLevelFdr                         html  
    findSigLevelTrad                        html  
    getSigRegionsCompKC                     html  
    getSigSegments                          html  
    hsMirrorLocs                            html  
    hsSampleData                            html  
    idPoints                                html  
    mmMirrorLocs                            html  
    plot                                    html  
    plotScaleSpace                          html  
    probeAnnotation-class                   html  
    samplePointMatrix-class                 html  
    sigSegments-class                       html  
    spmCollection-class                     html  
    write.table                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (KCsmart)
Making 'packages.html' ... done