LDheatmap

Package: LDheatmap
Version: 0.99-1
Date: 2011-12-05
Title: Graphical display of pairwise linkage disequilibria between SNPs
Author: Ji-Hyung Shin <shin@sfu.ca>, Sigal Blay <sblay@sfu.ca>,
Nicholas Lewin-Koh <nikko@hailmail.net>, Brad McNeney
<mcneney@sfu.ca>, Jinko Graham <jgraham@sfu.ca>
Maintainer: Brad McNeney <mcneney@sfu.ca>
Depends: R (>= 2.14.0), grid
Imports: genetics
Suggests: rtracklayer, GenomicRanges, chopsticks (>= 1.18.0), lattice,
ggplot2
Description: Produces a graphical display, as a heat map, of measures
of pairwise linkage disequilibria between SNPs. Users may
optionally include the physical locations or genetic map
distances of each SNP on the plot.
License: GPL-3
URL: http://stat.sfu.ca/statgen/research/ldheatmap.html
Repository: CRAN
Date/Publication: 2013-09-21 08:12:53
Packaged: 2013-09-20 22:41:21 UTC; mcneney
NeedsCompilation: no

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'LDheatmap' ...
** package 'LDheatmap' successfully unpacked and MD5 sums checked
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'LDheatmap'
    finding HTML links ... done
    CEUData                                 html  
    CHBJPTData                              html  
    GIMAP5                                  html  
    GIMAP5CEU                               html  
    LDheatmap-internal                      html  
    LDheatmap                               html  
    LDheatmap.addGenes                      html  
    LDheatmap.addGrob                       html  
Rd warning: /tmp/Rtmp2Z4iNI/R.INSTALL44297a6c62b7/LDheatmap/man/LDheatmap.addGrob.Rd:18: missing file link 'grob'
    LDheatmap.addRecombRate                 html  
    LDheatmap.addScatterplot                html  
    LDheatmap.highlight                     html  
    LDheatmap.marks                         html  
    plotGenes                               html  
    recombRate                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (LDheatmap)
Making 'packages.html' ... done