Last data update: 2014.03.03


Package: LICORS
Type: Package
Title: Light Cone Reconstruction of States - Predictive State
Estimation From Spatio-Temporal Data
Version: 0.2.0
Date: 2013-11-20
Author: Georg M. Goerg <>
Maintainer: Georg M. Goerg <>
Description: Estimates predictive states from spatio-temporal data and
consequently can provide provably optimal forecasts.
Currently this implementation
supports an N-dimensional spatial grid observed over equally spaced time
intervals. E.g. a video is a 2D spatial systems observed over time. This
package implements mixed LICORS, has plotting tools (for (1+1)D and (2+1)D
systems), and methods for optimal forecasting. Due to memory limitations
it is recommend to only analyze (1+1)D systems.
License: GPL-2
Depends: R (>= 2.12.1)
Imports: RColorBrewer, mvtnorm, zoo, FNN, fields, locfit, Matrix
Suggests: huge, RANN, yaImpute, itertools
Collate: 'compute_LICORS_loglik.R' 'compute_mixture_penalty.R'
'compute_NEC.R' 'contCA00.R' 'data2LCs.R' 'estimate_LC_pdfs.R'
'estimate_state_adj_matrix.R' 'estimate_state_probs.R'
'get_LC_config.R' 'image2.R' 'initialize_states.R' 'kmeanspp.R'
'LC-utils.R' 'LICORS-package.R' 'merge_states.R'
'mixed_LICORS.R' 'normalize.R' 'predict_FLC_given_PLC.R'
'rdensity.R' 'relabel_vector.R' 'remove_small_sample_states.R'
'search_knn.R' 'setup_LC_geometry.R' 'sparsify_weights.R'
'states2weight_matrix.R' 'threshold.R' 'weight_matrix2states.R'
'wKDE.R' 'mixed_LICORS-utils.R' 'compute_LC_coordinates.R'
'compute_margin_coordinates.R' 'get_spacetime_grid.R'
Packaged: 2013-11-26 03:40:17 UTC; root
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2013-11-26 07:39:36

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'LICORS' ...
** package 'LICORS' successfully unpacked and MD5 sums checked
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'LICORS'
    finding HTML links ... done
    LC-utils                                html  
    LICORS-package                          html  
    compute_LC_coordinates                  html  
    compute_LICORS_loglik                   html  
    compute_NEC                             html  
    compute_margin_coordinates              html  
    compute_mixture_penalty                 html  
    contCA00                                html  
    data2LCs                                html  
    embed2                                  html  
    estimate_LC_pdfs                        html  
    estimate_state_adj_matrix               html  
    estimate_state_probs                    html  
    get_LC_config                           html  
    get_spacetime_grid                      html  
    image2                                  html  
    initialize_states                       html  
    kmeanspp                                html  
    merge_states                            html  
    mixed_LICORS-utils                      html  
    mixed_LICORS                            html  
    normalize                               html  
    predict_FLC_given_PLC                   html  
    rdensity                                html  
    relabel_vector                          html  
    remove_small_sample_states              html  
    search_knn                              html  
    setup_LC_geometry                       html  
    sparsify_weights                        html  
    states2weight_matrix                    html  
    threshold                               html  
    wKDE                                    html  
Rd warning: /tmp/RtmpGuo6pU/R.INSTALL450d4d1d7c50/LICORS/man/wKDE.Rd:41: missing file link 'approx'
    weight_matrix2states                    html  
** building package indices
** testing if installed package can be loaded
Making 'packages.html' ... done