Last data update: 2014.03.03
|
MANOR
Package: MANOR
Version: 1.44.0
Date: 2015-05-27
Title: CGH Micro-Array NORmalization
Author: Pierre Neuvial <pierre.neuvial@genopole.cnrs.fr>, Philippe Hupe
<philippe.hupe@curie.fr>
Maintainer: Pierre Neuvial <pierre.neuvial@genopole.cnrs.fr>
Depends: R (>= 2.10), GLAD
Imports: GLAD, graphics, grDevices, stats, utils
Description: Importation, normalization, visualization, and quality
control functions to correct identified sources of variability
in array-CGH experiments.
License: GPL-2
URL: http://bioinfo.curie.fr/projects/manor/index.html
biocViews: Microarray, TwoChannel, DataImport, QualityControl,
Preprocessing, CopyNumberVariation
NeedsCompilation: yes
Packaged: 2016-05-04 02:47:53 UTC; biocbuild
● BiocViews: CopyNumberVariation, DataImport, Microarray, Preprocessing, QualityControl, TwoChannel
●
10 images,
16 functions,
3 datasets
●
Reverse Depends: 0
Install log
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'MANOR' ...
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rnem_arg.c -o Rnem_arg.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rnem_exe.c -o Rnem_exe.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c exememo.c -o exememo.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nem_alg.c -o nem_alg.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nem_hlp.c -o nem_hlp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nem_mod.c -o nem_mod.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nem_nei.c -o nem_nei.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nem_rnd.c -o nem_rnd.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nem_ver.c -o nem_ver.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o MANOR.so Rnem_arg.o Rnem_exe.o exememo.o nem_alg.o nem_hlp.o nem_mod.o nem_nei.o nem_rnd.o nem_ver.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/MANOR/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'MANOR'
finding HTML links ... done
MANOR-internal html
arrayTrend html
detectSB html
flag.arrayCGH html
flag.summary html
flags html
genome.plot html
html.report html
import html
nem html
norm html
qscore html
qscore.arrayCGH html
qscore.summary html
qscores html
report.plot html
sort html
spatial html
to.flag html
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (MANOR)
Making 'packages.html' ... done
|