MSeasy

Package: MSeasy
Type: Package
Title: Preprocessing of Gas Chromatography-Mass Spectrometry (GC-MS)
data
Version: 5.3.3
Date: 2013-03-18
Depends: amap, clValid, cluster, fpc, mzR, xcms
Suggests: tcltk
Author: Elodie Courtois <courtoiselodie@gmail.com>, Yann Guitton
<yann.guitton@gmail.com>, Florence Nicole
<florence.nicole@univ-st-etienne.fr>
Maintainer: Yann GUITTON <yann.guitton@gmail.com>
Description: Package for the detection of molecules in complex mixtures
of compounds. It creates an initial_DATA matrix from several
GC-MS analyses by collecting and assembling the information
from chromatograms and mass spectra (MS.DataCreation), It can
read several format (ASCII, CDF, mzML, mzXML or mzData).It
tests for the best unsupervised clustering method to group
similar mass spectra into molecules (MS.test.clust).It runs the
optimal unsupervised clustering method on the initial_DATA
matrix, identifies the optimal number of clusters, produces
different files for facilitating the quality control and
identification of putative molecules, and returns
fingerprinting or profiling matrices (MS.clust).It converts
output files from MS.clust for NIST mass spectral library
search and ARISTO webtool search
License: GPL-2
URL: http://sites.google.com/site/rpackagemseasy/
LazyData: yes
Packaged: 2013-03-19 16:52:04 UTC; chimimar
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2013-03-20 17:07:31

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'MSeasy' ...
** package 'MSeasy' successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'MSeasy'
    finding HTML links ... done
    ASCII_MSDataCreation                    html  
    ASCII_MSclust                           html  
    ASCII_TransASCII                        html  
    Agilent_MSDataCreation                  html  
    Agilent_quantF_MSclust                  html  
    Agilent_quantT_MSclust                  html  
    Data_testclust                          html  
    MS.DataCreation                         html  
    MS.clust                                html  
    MS.test.clust                           html  
    MSeasy-package                          html  
    MSeasyToARISTO                          html  
    MSeasyToMSP                             html  
    SearchNIST                              html  
    trans.ASCII                             html  
** building package indices
** testing if installed package can be loaded
* DONE (MSeasy)
Making 'packages.html' ... done