MVB

Package: MVB
Type: Package
Title: Mutivariate Bernoulli log-linear model
Version: 1.1
Date: 2012-12-29
Author: Bin Dai
Maintainer: Bin Dai <dai@stat.wisc.edu>
Description: Fit log-linear model for multivariate Bernoulli
distribution with mixed effect models and LASSO
License: GPL (>= 2.0)
Depends: Rcpp (>= 0.9.9), RcppArmadillo (>= 0.2.34)
LinkingTo: Rcpp, RcppArmadillo
Packaged: 2013-12-15 09:26:58 UTC; ripley
Repository: CRAN
Date/Publication: 2013-12-15 11:24:08
NeedsCompilation: yes

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'MVB' ...
** package 'MVB' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c binomial.cpp -o binomial.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c distriFactory.cpp -o distriFactory.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c gaussian.cpp -o gaussian.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c gme.cpp -o gme.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c lps.cpp -o lps.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c mvbernoulli.cpp -o mvbernoulli.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include"   -fpic  -g -O2  -c mvbfit.cpp -o mvbfit.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o MVB.so binomial.o distriFactory.o gaussian.o gme.o lps.o mvbernoulli.o mvbfit.o -L/home/ddbj/local/lib64/R/lib -lRlapack -L/home/ddbj/local/lib64/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/MVB/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'MVB'
    finding HTML links ... done
    MVB-package                             html  
    loglike                                 html  
    mvb.simu                                html  
    mvbfit                                  html  
    mvblps                                  html  
    mvbme                                   html  
    stepfit                                 html  
    unifit                                  html  
    unilps                                  html  
** building package indices
** testing if installed package can be loaded
* DONE (MVB)
Making 'packages.html' ... done