Last data update: 2014.03.03
Title: MethylMix: Identifying methylation driven cancer genes.
Author: Olivier Gevaert
Maintainer: Olivier Gevaert <firstname.lastname@example.org>
Description: MethylMix is an algorithm implemented to identify hyper
and hypomethylated genes for a disease. MethylMix is based on a
beta mixture model to identify methylation states and compares
them with the normal DNA methylation state. MethylMix uses a
novel statistic, the Differential Methylation value or DM-value
defined as the difference of a methylation state with the
normal methylation state. Finally, matched gene expression data
is used to identify, besides differential, functional
methylation states by focusing on methylation changes that
effect gene expression.
Depends: R (>= 3.1.1)
Imports: foreach, parallel, doParallel, RColorBrewer, optimx, RPMM
DifferentialExpression, Pathways, Network
Packaged: 2016-05-04 05:43:20 UTC; biocbuild
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'MethylMix' ...
** preparing package for lazy loading
*** installing help indices
converting help for package 'MethylMix'
finding HTML links ... done
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (MethylMix)
Making 'packages.html' ... done