NOISeq

Package: NOISeq
Type: Package
Title: Exploratory analysis and differential expression for RNA-seq
data
Version: 2.16.0
Date: 2014-02-24
Author: Sonia Tarazona, Pedro Furio-Tari, Maria Jose Nueda, Alberto Ferrer and Ana Conesa
Maintainer: Sonia Tarazona <starazona@cipf.es>
Depends: R (>= 2.13.0), methods, Biobase (>= 2.13.11), splines (>=
3.0.1), Matrix (>= 1.2)
Description: Analysis of RNA-seq expression data or other similar kind
of data. Exploratory plots to evualuate saturation, count
distribution, expression per chromosome, type of detected
features, features length, etc. Differential expression between
two experimental conditions with no parametric assumptions.
License: Artistic-2.0
LazyLoad: yes
biocViews: RNASeq, DifferentialExpression, Visualization, Sequencing
NeedsCompilation: no
Packaged: 2016-05-04 04:46:16 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'NOISeq' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'NOISeq'
    finding HTML links ... done
    ARSyNSeq                                html  
    Biodetection                            html  
    CD                                      html  
    CountsBio                               html  
    DE.plot                                 html  
    GCcontentBias                           html  
    LengthBias                              html  
    Marioni                                 html  
    Output                                  html  
    PCA.GENES                               html  
    PCA                                     html  
    QCreport                                html  
    Saturation                              html  
    dat                                     html  
    dat2save                                html  
    degenes                                 html  
    example                                 html  
    explo.plot                              html  
    filter.low.counts                       html  
    myCounts                                html  
    noiseq                                  html  
    noiseqbio                               html  
    normalization                           html  
    readData                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (NOISeq)
Making 'packages.html' ... done