NuPoP

Package: NuPoP
Type: Package
Title: An R package for nucleosome positioning prediction
Version: 1.22.0
Date: 2010-06-24
Author: Ji-Ping Wang <jzwang@northwestern.edu>; Liqun Xi <lxi700@northwestern.edu>
Maintainer: Ji-Ping Wang<jzwang@northwestern.edu>
Description: NuPoP is an R package for Nucleosome Positioning Prediction.This package is built upon a duration hidden Markov model proposed in Xi et al, 2010; Wang et al, 2008. The core of the package was written in Fotran. In addition to the R package, a stand-alone Fortran software tool is also available at http://nucleosome.stats.northwestern.edu.
License: GPL-2
biocViews: Genetics,Visualization,Classification
Depends: R (>= 2.10)
NeedsCompilation: yes
Packaged: 2016-05-04 03:42:20 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'NuPoP' ...
** libs
gfortran  -fpic -g -O2  -c  vtbfb.f90 -o vtbfb.o
gfortran  -fpic -g -O2  -c  vtbfbNL4.f90 -o vtbfbNL4.o
gfortran -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o NuPoP.so vtbfb.o vtbfbNL4.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/NuPoP/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'NuPoP'
    finding HTML links ... done
    NuPoP-package                           html  
    plotNuPoP                               html  
    predNuPoP                               html  
    readNuPoP                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (NuPoP)
Making 'packages.html' ... done