Polyfit

Package: Polyfit
Type: Package
Title: Add-on to DESeq to improve p-values and q-values
Version: 1.6.0
Date: 2014-08-06
Author: Conrad Burden
biocViews: DifferentialExpression, Sequencing, RNASeq, GeneExpression
Maintainer: Conrad Burden <conrad.burden@anu.edu.au>
Depends: DESeq
Suggests: BiocStyle
Description: Polyfit is an add-on to the packages DESeq which ensures the p-value distribution is uniform over the interval [0, 1] for data satisfying the null hypothesis of no differential expression, and uses an adpated Storey-Tibshiran method to calculate q-values.
License: GPL (>= 3)
Packaged: 2016-05-04 05:35:12 UTC; biocbuild
NeedsCompilation: no

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'Polyfit' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'Polyfit'
    finding HTML links ... done
    Polyfit-package                         html  
    finding level-2 HTML links ... done

    levelPValues                            html  
    pfNbinomTest                            html  
    twoSidedPValueFromDiscrete              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (Polyfit)
Making 'packages.html' ... done