R4RNA

Package: R4RNA
Type: Package
Title: An R package for RNA visualization and analysis
Version: 1.0.0
Date: 2015-11-02
Author: Daniel Lai, Irmtraud Meyer <irmtraud.meyer@cantab.net>
Maintainer: Daniel Lai <jujubix@cs.ubc.ca>
Depends: R (>= 3.2.0), Biostrings (>= 2.38.0)
Description: A package for RNA basepair analysis, including the visualization of basepairs as arc diagrams for easy comparison and annotation of sequence
and structure. Arc diagrams can additionally be projected onto multiple sequence alignments to assess basepair conservation and
covariation, with numerical methods for computing statistics for each.
License: GPL-3
biocViews: Alignment, MultipleSequenceAlignment, Preprocessing,
Visualization, DataImport, DataRepresentation,
MultipleComparison
URL: http://www.e-rna.org/r-chie/
NeedsCompilation: no
Packaged: 2016-05-04 06:39:26 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'R4RNA' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'R4RNA'
    finding HTML links ... done
    R4RNA-package                           html  
    alignmentStatistics                     html  
    as.helix                                html  
    basepairFrequency                       html  
    blankPlot                               html  
    colourHelices                           html  
    expandCollapseHelix                     html  
    helix                                   html  
    logicalHelix                            html  
    logseq                                  html  
    plotCovariance                          html  
    plotHelix                               html  
    readStructure                           html  
    structureMismatchScore                  html  
    unknottedGroups                         html  
    viennaToHelix                           html  
    writeHelix                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (R4RNA)
Making 'packages.html' ... done