RPANDA

Package: RPANDA
Version: 1.2
Date: 2016-03-30
Type: Package
Title: Phylogenetic ANalyses of DiversificAtion
Depends: R (>= 2.14.2), picante
Suggests: testthat
Imports: ape, pspline, deSolve, igraph, TESS, cluster, fpc, pvclust,
corpcor, phytools, stats, graphics, grDevices, utils
Encoding: UTF-8
Author: Hélène Morlon [aut, cre, cph]
Authors@R: c(person("Hélène", "Morlon", role = c("aut", "cre", "cph"), email = "morlon@biologie.ens.fr"))
Maintainer: Hélène Morlon <morlon@biologie.ens.fr>
Description: Implements macroevolutionary analyses on phylogenetic trees. See Morlon et al. (2010) <DOI:10.1371/journal.pbio.1000493>, Morlon et al. (2011) <DOI:10.1073/pnas.1102543108>, Condamine et al. (2013) <DOI:10.1111/ele.12062>, Morlon et al. (2014) <DOI:10.1111/ele.12251>, Manceau et al. (2015) <DOI:10.1111/ele.12415>, Lewitus & Morlon (2016) <DOI:10.1093/sysbio/syv116>, and Drury et al. (2016) <DOI:10.1093/sysbio/syw020>.
License: GPL-2
URL: https://github.com/hmorlon/PANDA
Packaged: 2016-03-31 15:51:18 UTC; helenemorlon
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2016-03-31 18:47:57

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'RPANDA' ...
** package 'RPANDA' successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'RPANDA'
    finding HTML links ... done
    Anolis.data                             html  
    BICompare                               html  
    Balaenopteridae                         html  
    Calomys                                 html  
    Cetacea                                 html  
    CreateGeoObject                         html  
    finding level-2 HTML links ... done

    InfTemp                                 html  
    JSDtree                                 html  
    JSDtree_cluster                         html  
    Phocoenidae                             html  
    Phyllostomidae                          html  
    Phyllostomidae_genera                   html  
    RPANDA-package                          html  
    fit_bd                                  html  
    fit_coal_cst                            html  
    fit_coal_var                            html  
    fit_env                                 html  
    fit_sgd                                 html  
    fit_t_comp                              html  
    likelihood_bd                           html  
    likelihood_coal_cst                     html  
    likelihood_coal_var                     html  
    likelihood_sgd                          html  
    likelihood_t_DD                         html  
    likelihood_t_DD_geog                    html  
    likelihood_t_MC                         html  
    likelihood_t_MC_geog                    html  
    plot_BICompare                          html  
    plot_dtt                                html  
    plot_fit_bd                             html  
    plot_fit_env                            html  
    plot_spectR                             html  
    sim_sgd                                 html  
    sim_t_comp                              html  
    spectR                                  html  
** building package indices
** testing if installed package can be loaded
* DONE (RPANDA)
Making 'packages.html' ... done