SDMTools

Package: SDMTools
Type: Package
Title: Species Distribution Modelling Tools: Tools for processing data
associated with species distribution modelling exercises
Version: 1.1-221
Date: 2014-08-05
Author: Jeremy VanDerWal, Lorena Falconi, Stephanie Januchowski, Luke Shoo and
Collin Storlie
Maintainer: Jeremy VanDerWal <jjvanderwal@gmail.com>
Imports: R.utils
Suggests: adehabitat, raster, sp
Description: This packages provides a set of tools for post processing the
outcomes of species distribution modeling exercises. It includes novel
methods for comparing models and tracking changes in distributions through
time. It further includes methods for visualizing outcomes, selecting
thresholds, calculating measures of accuracy and landscape fragmentation
statistics, etc.. This package was made possible in part by financial
support from the Australian Research Council & ARC Research Network for
Earth System Science.
License: GPL (>= 3)
URL: http://www.rforge.net/SDMTools/
LazyLoad: yes
Packaged: 2014-08-05 09:29:35 UTC; svnuser
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2014-08-05 12:16:01

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'SDMTools' ...
** package 'SDMTools' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c ConnectedComponentLabelling.c -o ConnectedComponentLabelling.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c getmin.c -o getmin.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c movewindow.c -o movewindow.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c patchstats.c -o patchstats.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c pointinpolygon.c -o pointinpolygon.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c slope.aspect.c -o slope.aspect.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c vincenty.geodesics.c -o vincenty.geodesics.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c writeasciidata.c -o writeasciidata.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o SDMTools.so ConnectedComponentLabelling.o getmin.o movewindow.o patchstats.o pointinpolygon.o slope.aspect.o vincenty.geodesics.o writeasciidata.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/SDMTools/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'SDMTools'
    finding HTML links ... done
    COGravity                               html  
    ClassStat                               html  
    ConnCompLabel                           html  
    Istat                                   html  
    Kappa                                   html  
    PatchStat                               html  
    Scalebar                                html  
    SigDiff                                 html  
    ZonalStat                               html  
    accuracy                                html  
    asc.from.raster                         html  
    asc2dataframe                           html  
    auc                                     html  
    circular.averaging                      html  
    compare.matrix                          html  
    confusion.matrix                        html  
    destination                             html  
    distance                                html  
    extract.data                            html  
    getXYcoords                             html  
    grid.area                               html  
    grid.info                               html  
    lcmw                                    html  
    legend.gradient                         html  
    omission                                html  
    optim.thresh                            html  
    pnt.in.poly                             html  
    put.data                                html  
    quick.map                               html  
    read.asc                                html  
    slope                                   html  
    wt.mean                                 html  
** building package indices
** testing if installed package can be loaded
* DONE (SDMTools)
Making 'packages.html' ... done