SNPchip

Package: SNPchip
Version: 2.18.0
Title: Visualizations for copy number alterations
Author: Robert Scharpf <rscharpf@jhu.edu> and Ingo Ruczinski
Maintainer: Robert Scharpf <rscharpf@jhu.edu>
Depends: R (>= 2.14.0)
Imports: methods, graphics, lattice, grid, foreach, utils, Biobase,
S4Vectors (>= 0.9.25), IRanges, GenomeInfoDb, GenomicRanges,
SummarizedExperiment, oligoClasses (>= 1.31.1)
Suggests: crlmm (>= 1.17.14), RUnit
Enhances: doSNOW, VanillaICE (>= 1.21.24), RColorBrewer
Description: This package defines methods for visualizing
high-throughput genomic data
License: LGPL (>= 2)
LazyLoad: yes
Collate: AllGenerics.R coerce-methods.R xyplot-methods.R
grid-functions.R idiogram-functions.R panel-functions.R
annotation-functions.R zzz.R
URL: http://www.biostat.jhsph.edu/~iruczins/software/snpchip.html
biocViews: CopyNumberVariation, SNP, GeneticVariability, Visualization
NeedsCompilation: no
Packaged: 2016-05-04 02:51:01 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'SNPchip' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'SNPchip'
    finding HTML links ... done
    arrangeFigs                             html  
    arrangeSideBySide                       html  
    centromere                              html  
    dataFrame-methods                       html  
    dataFrame                               html  
    defunct                                 html  
    getCytoband                             html  
    latticeFigs                             html  
    plotIdiogram                            html  
    xypanel                                 html  
    xypanelBaf                              html  
    xyplot                                  html  
    xyplotLrrBaf                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (SNPchip)
Making 'packages.html' ... done