WeightedCluster

Package: WeightedCluster
Version: 1.2
Date: 2014-01-16
Title: Clustering of Weighted Data
Authors@R: person("Matthias", "Studer", email = "matthias.studer@unige.ch", role = c("aut", "cre"))
Depends: R (>= 3.0.0), TraMineR (>= 1.8-8), cluster
Imports: utils, RColorBrewer
Suggests: RUnit, knitr, isotone, vegan, lattice
VignetteBuilder: knitr
Description: The WeightedCluster library provides functions to cluster states sequences and weighted data. These functionalities include aggregating replicated cases, an optimized weighted PAM algorithm, function computing cluster quality measures for a range of clustering solutions and miscellaneous functions to plot clustering solutions of state sequences.
License: GPL (>= 2)
URL: http://mephisto.unige.ch/weightedcluster
Packaged: 2014-01-19 13:09:29 UTC; Matthias-Util
Author: Matthias Studer [aut, cre]
Maintainer: Matthias Studer <matthias.studer@unige.ch>
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2014-01-19 14:22:57

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'WeightedCluster' ...
** package 'WeightedCluster' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c PAM.cpp -o PAM.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c PAMonce.cpp -o PAMonce.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c PAMoncebody.cpp -o PAMoncebody.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c cluster.cpp -o cluster.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c clusterquality.cpp -o clusterquality.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c clusterqualitybody.cpp -o clusterqualitybody.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c kmedoid.cpp -o kmedoid.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c kmedoidbase.cpp -o kmedoidbase.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c kmedoidbasebody.cpp -o kmedoidbasebody.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c kmedoidbody.cpp -o kmedoidbody.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o WeightedCluster.so PAM.o PAMonce.o PAMoncebody.o cluster.o clusterquality.o clusterqualitybody.o kmedoid.o kmedoidbase.o kmedoidbasebody.o kmedoidbody.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/WeightedCluster/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'WeightedCluster'
    finding HTML links ... done
    as.clustrange                           html  
    as.seqtree                              html  
    clusterquality                          html  
    kmedoids                                html  
    kmedrange                               html  
    seqclustname                            html  
    finding level-2 HTML links ... done

    wcAggregateCases                        html  
    wcCmpCluster                            html  
    wcSilhouetteObs                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (WeightedCluster)
Making 'packages.html' ... done