airway

Package: airway
Title: RangedSummarizedExperiment for RNA-Seq in airway smooth muscle
cells, by Himes et al PLoS One 2014
Version: 0.106.2
Author: Michael Love
Maintainer: Michael Love <michaelisaiahlove@gmail.com>
Description: This package provides a RangedSummarizedExperiment object
of read counts in genes for an RNA-Seq experiment on four human
airway smooth muscle cell lines treated with dexamethasone.
Details on the gene model and read counting procedure are
provided in the package vignette. The citation for the
experiment is: Himes BE, Jiang X, Wagner P, Hu R, Wang Q,
Klanderman B, Whitaker RM, Duan Q, Lasky-Su J, Nikolos C,
Jester W, Johnson M, Panettieri R Jr, Tantisira KG, Weiss ST,
Lu Q. 'RNA-Seq Transcriptome Profiling Identifies CRISPLD2 as a
Glucocorticoid Responsive Gene that Modulates Cytokine Function
in Airway Smooth Muscle Cells.' PLoS One. 2014 Jun
13;9(6):e99625. PMID: 24926665. GEO: GSE52778.
biocViews: ExperimentData, SequencingData, RNASeqData, GEO
License: LGPL
Depends: R (>= 2.10), SummarizedExperiment
Suggests: knitr, GEOquery
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2016-05-28 15:35:47 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'airway' ...
** data
** inst
** help
*** installing help indices
  converting help for package 'airway'
    finding HTML links ... done
    airway                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (airway)
Making 'packages.html' ... done