anota

Package: anota
Version: 1.20.0
Date: 2011-03-03
Title: ANalysis Of Translational Activity (ANOTA).
Author: Ola Larsson <ola.larsson@ki.se>, Nahum Sonenberg
<nahum.sonenberg@mcgill.ca>, Robert Nadon
<robert.nadon@mcgill.ca>
Maintainer: Ola Larsson <ola.larsson@ki.se>
Description: Genome wide studies of translational control is emerging
as a tool to study verious biological conditions. The output
from such analysis is both the mRNA level (e.g. cytosolic mRNA
level) and the levl of mRNA actively involved in translation
(the actively translating mRNA level) for each mRNA. The
standard analysis of such data strives towards identifying
differential translational between two or more sample classes -
i.e. differences in actively translated mRNA levels that are
independent of underlying differences in cytosolic mRNA levels.
This package allows for such analysis using partial variances
and the random variance model. As 10s of thousands of mRNAs are
analyzed in parallell the library performs a number of tests to
assure that the data set is suitable for such analysis.
Imports: multtest, qvalue
Depends: qvalue
LazyData: yes
LazyLoad: yes
License: GPL-3
biocViews: GeneExpression, DifferentialExpression, Microarray,
Sequencing
NeedsCompilation: no
Packaged: 2016-05-04 04:02:26 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'anota' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'anota'
    finding HTML links ... done
    anotaDataSet                            html  
    anotaGetSigGenes                        html  
    anotaPerformQc                          html  
    anotaPlotSigGenes                       html  
    anotaResidOutlierTest                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (anota)
Making 'packages.html' ... done