apTreeshape

Package: apTreeshape
Date: 2009-03-13
Version: 1.4-5
Title: Analyses of Phylogenetic Treeshape
Author: Nicolas Bortolussi, Eric Durand, Michael Blum
<michael.blum@imag.fr>, Olivier Francois
<olivier.francois@imag.fr>
Maintainer: Michael Blum <michael.blum@imag.fr>
Depends: R (>= 2.0.0), ape
Imports: quantreg
Description: apTreeshape is mainly dedicated to simulation and analysis
of phylogenetic tree topologies using statistical indices. It
is a companion library of the 'ape' package. It provides
additional functions for reading, plotting, manipulating
phylogenetic trees. It also offers convenient web-access to
public databases, and enables testing null models of
macroevolution using corrected test statistics. Trees of class
"phylo" (from 'ape' package) can be converted easily.
License: GPL (>= 2)
Encoding: latin1
Repository: CRAN
Date/Publication: 2012-11-09 07:03:26
Packaged: 2012-11-09 03:46:07 UTC; ripley

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'apTreeshape' ...
** package 'apTreeshape' successfully unpacked and MD5 sums checked
** R
** data
** demo
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'apTreeshape'
    finding HTML links ... done
    aldous.test                             html  
    all.equal.treeshape                     html  
    apTreeshape-internal                    html  
    as.phylo.treeshape                      html  
    as.treeshape                            html  
    carnivora.treeshape                     html  
    cladesize                               html  
    colless                                 html  
    cutreeshape                             html  
    cytochromc                              html  
    hivtree.treeshape                       html  
    index.test                              html  
    likelihood.test                         html  
    maxlik.betasplit                        html  
    plot.treeshape                          html  
    primates                                html  
    rhodopsin                               html  
    rtreeshape                              html  
    sackin                                  html  
    shape.statistic                         html  
    shift.test                              html  
    smaller.clade.spectrum                  html  
    spectrum.treeshape                      html  
    subtree.test                            html  
    summary.treeshape                       html  
    tipsubtree                              html  
    treeshape                               html  
    universal.treeshape                     html  
** building package indices
** testing if installed package can be loaded
* DONE (apTreeshape)
Making 'packages.html' ... done