biganalytics

Package: biganalytics
Version: 1.1.14
Date: 2016-02-17
Title: Utilities for 'big.matrix' Objects from Package 'bigmemory'
Author: John W. Emerson <jayemerson@gmail.com> and Michael J. Kane
<kaneplusplus@gmail.com>
Maintainer: Michael J. Kane <bigmemoryauthors@gmail.com>
Contact: Jay and Mike <bigmemoryauthors@gmail.com>
Depends: methods, stats, utils, bigmemory (>= 4.0.0), foreach, biglm
LinkingTo: Rcpp, bigmemory, BH
Description: Extend the 'bigmemory' package with various analytics.
Functions 'bigkmeans' and 'binit' may also be used with native R objects.
For 'tapply'-like functions, the bigtabulate package may also be helpful.
For linear algebra support, see 'bigalgebra'. For mutex (locking) support
for advanced shared-memory usage, see 'synchronicity'.
License: LGPL-3 | Apache License 2.0
Copyright: (C) 2013 John W. Emerson and Michael J. Kane
URL: http://www.bigmemory.org
LazyLoad: yes
Biarch: yes
RoxygenNote: 5.0.1
NeedsCompilation: yes
Packaged: 2016-02-17 22:46:28 UTC; vagrant
Repository: CRAN
Date/Publication: 2016-02-18 06:51:28

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'biganalytics' ...
** package 'biganalytics' successfully unpacked and MD5 sums checked
  checking for Sun Studio compiler...no
  checking for OS...Linux
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../include -DLINUX -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/bigmemory/include" -I"/home/ddbj/local/lib64/R/library/BH/include"   -fpic  -g -O2  -c binit.cpp -o binit.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../include -DLINUX -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/bigmemory/include" -I"/home/ddbj/local/lib64/R/library/BH/include"   -fpic  -g -O2  -c hash.cpp -o hash.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../include -DLINUX -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/bigmemory/include" -I"/home/ddbj/local/lib64/R/library/BH/include"   -fpic  -g -O2  -c kmeans.cpp -o kmeans.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../include -DLINUX -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/bigmemory/include" -I"/home/ddbj/local/lib64/R/library/BH/include"   -fpic  -g -O2  -c summary_stat.cpp -o summary_stat.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o biganalytics.so binit.o hash.o kmeans.o summary_stat.o -lrt -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/biganalytics/libs
** R
** preparing package for lazy loading
Creating a generic function for 'apply' from package 'base' in package 'biganalytics'
Creating a generic function for 'mean' from package 'base' in package 'biganalytics'
Creating a generic function for 'summary' from package 'base' in package 'biganalytics'
** help
*** installing help indices
  converting help for package 'biganalytics'
    finding HTML links ... done
    apply-methods                           html  
    biganalytics-package                    html  
    bigkmeans                               html  
    biglm.big.matrix                        html  
    binit                                   html  
    summary.stat                            html  
** building package indices
** testing if installed package can be loaded
* DONE (biganalytics)
Making 'packages.html' ... done