bios2mds

Package: bios2mds
Title: From BIOlogical Sequences to MultiDimensional Scaling
Version: 1.2.2
Date: 2012-06-01
Author: Julien Pele with Jean-Michel Becu, Herve Abdi, and Marie
Chabbert
Maintainer: Marie Chabbert <marie.chabbert@univ-angers.fr>
Depends: R (>= 2.12), amap, e1071, scales, cluster, rgl
Description: Bios2mds is primarily dedicated to the analysis of
biological sequences by metric MultiDimensional Scaling with
projection of supplementary data. It contains functions for
reading multiple sequence alignment files, calculating distance
matrices, performing metric multidimensional scaling and
visualizing results.
License: GPL
Repository: CRAN
Packaged: 2012-06-04 14:17:04 UTC; jmi
Date/Publication: 2012-06-05 11:16:15

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'bios2mds' ...
** package 'bios2mds' successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'bios2mds'
    finding HTML links ... done
    bios2mds-package                        html  
    col.group                               html  
    dif                                     html  
    dis                                     html  
    export.fasta                            html  
    extract.cluster                         html  
    gpcr                                    html  
    import.fasta                            html  
    import.msf                              html  
    kmeans.run                              html  
    mat.dif                                 html  
    mat.dis                                 html  
    mmds.2D.multi                           html  
    mmds.2D.plot                            html  
    mmds.3D.plot                            html  
    mmds                                    html  
    mmds.plot                               html  
    mmds.project                            html  
    random.msa                              html  
    scree.plot                              html  
    sil.score                               html  
    sub.mat                                 html  
    write.mmds.pdb                          html  
** building package indices
** testing if installed package can be loaded
* DONE (bios2mds)
Making 'packages.html' ... done