bnstruct

Package: bnstruct
Description: Bayesian Network Structure Learning from Data with Missing Values.
The package implements the Silander-Myllymaki complete search,
the Max-Min Hill-climbing heuristic search, and the Structural
Expectation-Maximization algorithm. Available scoring functions are
BDeu, AIC, BIC. The package also implements methods for generating and using
bootstrap samples, imputed data, inference.
Type: Package
Title: Bayesian Network Structure Learning from Data with Missing
Values
Version: 1.0
Date: 2012-02-13
Depends: R (>= 2.10), bitops, Matrix, methods
Imports: igraph
Suggests: graph, Rgraphviz, knitr, testthat
Authors@R: c(person("Francesco", "Sambo", role=c("aut","cre"), email="francesco.sambo@dei.unipd.it"),
person("Alberto", "Franzin", role=c("aut"), email="afranzin@ulb.ac.be"))
License: GPL (>= 2) | file LICENSE
Encoding: UTF-8
Packaged: 2015-07-30 07:21:22 UTC; sambofra
Author: Francesco Sambo [aut, cre],
Alberto Franzin [aut]
Maintainer: Francesco Sambo <francesco.sambo@dei.unipd.it>
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-07-30 09:59:26

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'bnstruct' ...
** package 'bnstruct' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c impfast.c -o impfast.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c mmhcfast.c -o mmhcfast.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c smfast.c -o smfast.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c util.c -o util.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o bnstruct.so impfast.o mmhcfast.o smfast.o util.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/bnstruct/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'bnstruct'
    finding HTML links ... done
    BN-class                                html  
    BNDataset-class                         html  
    InferenceEngine-class                   html  
    add.observations-set                    html  
    asia                                    html  
    asia_10000                              html  
    belief.propagation                      html  
    bn-method                               html  
    bn-set                                  html  
    boot                                    html  
    boots-set                               html  
    boots                                   html  
    bootstrap                               html  
    build.junction.tree                     html  
    child                                   html  
    child_NA_5000                           html  
    complete                                html  
    cpts-set                                html  
    cpts                                    html  
    dag-set                                 html  
    dag                                     html  
    dag.to.cpdag                            html  
    data.file-set                           html  
    data.file                               html  
    discreteness-set                        html  
    discreteness                            html  
    em                                      html  
    get.most.probable.values                html  
    has.boots                               html  
    has.imputed.boots                       html  
    has.imputed.data                        html  
    has.raw.data                            html  
    header.file-set                         html  
    header.file                             html  
    imp.boots-set                           html  
    imp.boots                               html  
    impute                                  html  
    imputed.data-set                        html  
    imputed.data                            html  
    jpts-set                                html  
    jpts                                    html  
    jt.cliques-set                          html  
    jt.cliques                              html  
    junction.tree-set                       html  
    junction.tree                           html  
    knn.impute                              html  
    layering                                html  
    learn.network                           html  
    learn.params                            html  
    learn.structure                         html  
    marginals                               html  
    name-set                                html  
    name                                    html  
    node.sizes-set                          html  
    node.sizes                              html  
    num.boots-set                           html  
    num.boots                               html  
    num.items-set                           html  
    num.items                               html  
    num.nodes-set                           html  
    num.nodes                               html  
    num.variables-set                       html  
    num.variables                           html  
    observations-set                        html  
    observations                            html  
    plot                                    html  
    print                                   html  
    raw.data-set                            html  
    raw.data                                html  
    read.bif                                html  
    read.dataset                            html  
    read.dsc                                html  
    read.net                                html  
    sample.dataset                          html  
    sample.row                              html  
    save.to.eps                             html  
    scoring.func-set                        html  
    scoring.func                            html  
    shd                                     html  
    show                                    html  
    struct.algo-set                         html  
    struct.algo                             html  
    test.updated.bn                         html  
    tune.knn.impute                         html  
    updated.bn-method                       html  
    updated.bn-set                          html  
    variables-set                           html  
    variables                               html  
    wpdag-set                               html  
    wpdag                                   html  
    wpdag.from.dag                          html  
    write.dsc                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (bnstruct)
Making 'packages.html' ... done