calmate

Package: calmate
Version: 0.12.1
Depends: R (>= 3.0.3), R.utils (>= 2.1.0), aroma.core (>= 2.14.0)
Imports: utils, MASS, R.methodsS3 (>= 1.7.0), R.oo (>= 1.19.0),
matrixStats (>= 0.14.2), R.filesets (>= 2.9.0)
Suggests: DNAcopy
Date: 2015-10-26
Title: Improved Allele-Specific Copy Number of SNP Microarrays for
Downstream Segmentation
Description: A multi-array post-processing method of allele-specific copy-number estimates (ASCNs).
Authors@R: c(
person("Maria", "Ortiz", role=c("aut", "ctb")),
person("Ander", "Aramburu", role=c("ctb")),
person("Henrik", "Bengtsson", role=c("aut", "cre", "cph"),
email="henrikb@braju.com"),
person("Pierre", "Neuvial", role=c("aut", "ctb")),
person("Angel", "Rubio", role=c("aut", "ctb")))
License: LGPL (>= 2.1)
URL: https://github.com/HenrikBengtsson/calmate/
BugReports: https://github.com/HenrikBengtsson/calmate/issues
LazyLoad: TRUE
biocViews: aCGH, CopyNumberVariants, SNP, Microarray, OneChannel,
TwoChannel, Genetics
NeedsCompilation: no
Packaged: 2015-10-27 04:09:22 UTC; hb
Author: Maria Ortiz [aut, ctb],
Ander Aramburu [ctb],
Henrik Bengtsson [aut, cre, cph],
Pierre Neuvial [aut, ctb],
Angel Rubio [aut, ctb]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Repository: CRAN
Date/Publication: 2015-10-27 08:09:53

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'calmate' ...
** package 'calmate' successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'calmate'
    finding HTML links ... done
    CalMaTeCalibration                      html  
    Non-documented_objects                  html  
    calmate-package                         html  
    calmateByThetaAB.array                  html  
    calmateByTotalAndFracB.array            html  
    fitCalMaTe.matrix                       html  
    fitCalMaTeCNprobes.matrix               html  
    fitCalMaTeInternal                      html  
    thetaAB2TotalAndFracB.array             html  
** building package indices
** testing if installed package can be loaded
* DONE (calmate)
Making 'packages.html' ... done