cellHTS

Package: cellHTS
Version: 1.42.0
Title: Analysis of cell-based screens
Author: Wolfgang Huber <huber@ebi.ac.uk>, Ligia Bras <ligia@ebi.ac.uk>,
Michael Boutros <m.boutros@dkfz.de>
Encoding: UTF-8
Maintainer: Andrzej Oleś <andrzej.oles@embl.de>
Depends: R (>= 2.10), grid
Imports: Biobase, prada, RColorBrewer, genefilter
Suggests: Category, ggplot2, GO.db, gridBase, vsn (>= 2.0.35)
Description: Analysis of cell-based RNA interference screens.
Reference: Michael Boutros and Ligia P. Bras L and Wolfgang Huber.
Analysis of cell-based RNAi screens. Genome Biology 7:7 R66
(2006).
License: Artistic-2.0
URL: http://www.dkfz.de/signaling
biocViews: CellBasedAssays, Visualization
PackageStatus: Deprecated
NeedsCompilation: no
Packaged: 2016-05-04 02:51:13 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'cellHTS' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'cellHTS'
    finding HTML links ... done
    Bscore                                  html  
    ROC                                     html  
    annotate                                html  
    bdgpbiomart                             html  
    configure                               html  
    data-KcViab                             html  
    data-KcViabSmall                        html  
    getEnVisionRawData                      html  
    getLibraryPlate                         html  
    getMatrix                               html  
    imageScreen                             html  
    normalizeChannels                       html  
    normalizePlates                         html  
    oneRowPerId                             html  
    plotPlateLibrary                        html  
    plotSpatialEffects                      html  
    print.cellHTS                           html  
    readPlateData                           html  
    screenMatch                             html  
    summarizeChannels                       html  
    summarizeReplicates                     html  
    write.tabdel                            html  
    writeReport                             html  
    writeTab                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: Package 'cellHTS' is deprecated and will be removed from Bioconductor
  version 3.4. Please consider using 'cellHTS2' which offers better
  functionality for working with multiple screens and with
  multi-channel screens.
* DONE (cellHTS)
Making 'packages.html' ... done