Last data update: 2014.03.03

chromPlot

Package: chromPlot
Type: Package
Title: Global visualization tool of genomic data
Version: 1.0.0
Date: 2016-02-17
Author: Ricardo A. Verdugo and Karen Y. Orostica
Maintainer: Karen Y. Orostica <korostica09@gmail.com>
Description: Package designed to visualize genomic data along the
chromosomes, where the vertical chromosomes are sorted by
number, with sex chromosomes at the end.
License: GPL (>= 2)
LazyLoad: yes
LazyData: yes
Depends: stats, utils, graphics, grDevices, datasets, base, biomaRt,
GenomicRanges, R (>= 3.3.0)
Suggests: qtl, GenomicFeatures, TxDb.Hsapiens.UCSC.hg19.knownGene
biocViews: DataRepresentation, FunctionalGenomics, Genetics,
Sequencing, Annotation, Visualization
NeedsCompilation: no
Packaged: 2016-05-04 06:48:44 UTC; biocbuild

● BiocViews: Annotation, DataRepresentation, FunctionalGenomics, Genetics, Sequencing, Visualization
1 images, 2 functions, 4 datasets
● Reverse Depends: 0

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'chromPlot' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'chromPlot'
    finding HTML links ... done
    chromPlot-package                       html  
    chromPlot                               html  
    hg_cytoBandIdeo                         html  
    hg_gap                                  html  
    mm10_cytoBandIdeo                       html  
    mm10_gap                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (chromPlot)
Making 'packages.html' ... done