Last data update: 2014.03.03
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chromPlot
Package: chromPlot
Type: Package
Title: Global visualization tool of genomic data
Version: 1.0.0
Date: 2016-02-17
Author: Ricardo A. Verdugo and Karen Y. Orostica
Maintainer: Karen Y. Orostica <korostica09@gmail.com>
Description: Package designed to visualize genomic data along the
chromosomes, where the vertical chromosomes are sorted by
number, with sex chromosomes at the end.
License: GPL (>= 2)
LazyLoad: yes
LazyData: yes
Depends: stats, utils, graphics, grDevices, datasets, base, biomaRt,
GenomicRanges, R (>= 3.3.0)
Suggests: qtl, GenomicFeatures, TxDb.Hsapiens.UCSC.hg19.knownGene
biocViews: DataRepresentation, FunctionalGenomics, Genetics,
Sequencing, Annotation, Visualization
NeedsCompilation: no
Packaged: 2016-05-04 06:48:44 UTC; biocbuild
● BiocViews: Annotation, DataRepresentation, FunctionalGenomics, Genetics, Sequencing, Visualization
●
1 images,
2 functions,
4 datasets
●
Reverse Depends: 0
Install log
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'chromPlot' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'chromPlot'
finding HTML links ... done
chromPlot-package html
chromPlot html
hg_cytoBandIdeo html
hg_gap html
mm10_cytoBandIdeo html
mm10_gap html
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (chromPlot)
Making 'packages.html' ... done
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