clstutils

Package: clstutils
Type: Package
Title: Tools for performing taxonomic assignment.
Version: 1.20.0
Depends: R (>= 2.10), clst, rjson, ape
Imports: lattice, RSQLite
Suggests: RUnit, RSVGTipsDevice
LazyLoad: yes
LazyData: yes
Author: Noah Hoffman
Maintainer: Noah Hoffman <ngh2@uw.edu>
Description: Tools for performing taxonomic assignment based on
phylogeny using pplacer and clst.
License: GPL-3
biocViews: Sequencing, Classification, Visualization, QualityControl
NeedsCompilation: no
Packaged: 2016-05-04 03:58:19 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'clstutils' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'clstutils'
    finding HTML links ... done
    classifyPlacements                      html  
Rd warning: /tmp/RtmpO9neuY/R.INSTALL135d2aa274a7/clstutils/man/classifyPlacements.Rd:31: missing file link 'classifyIter'
    clstutils-package                       html  
    finding level-2 HTML links ... done

    findOutliers                            html  
    maxDists                                html  
    prettyTree                              html  
    refpkgContents                          html  
    seqdat                                  html  
    seqs                                    html  
    taxonomyFromRefpkg                      html  
    treeDists                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (clstutils)
Making 'packages.html' ... done