cocorresp

Package: cocorresp
Type: Package
Title: Co-Correspondence Analysis Methods
Version: 0.3-0
Date: 2016-02-28
Depends: vegan (>= 2.2-0), R (>= 3.0.0)
Imports: stats, graphics, utils, grDevices
Suggests: testthat, knitr
Author: Original Matlab routines by C.J.F. ter Braak and A.P. Schaffers. R port by Gavin L. Simpson.
Function simpls based on simpls.fit (package pls) by Ron Wehrens and Bjorn-Helge Mevik.
Maintainer: Gavin L. Simpson <ucfagls@gmail.com>
Description: Fits predictive and symmetric co-correspondence analysis (CoCA) models to relate one data matrix
to another data matrix. More specifically, CoCA maximises the weighted covariance
between the weighted averaged species scores of one community and the weighted averaged species
scores of another community. CoCA attempts to find patterns that are common to both communities.
License: GPL-2
URL: https://github.com/gavinsimpson/cocorresp
BugReports: https://github.com/gavinsimpson/cocorresp/issues
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2016-02-28 20:51:33 UTC; gavin
Repository: CRAN
Date/Publication: 2016-02-29 01:16:09

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'cocorresp' ...
** package 'cocorresp' successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'cocorresp'
    finding HTML links ... done
    beetles                                 html  
    bryophyte                               html  
    coca                                    html  
Rd warning: /tmp/RtmpCuiXHu/R.INSTALL19e2856a5e0/cocorresp/man/coca.Rd:159: missing file link 'ordiParseFormula'
    cocorresp-internal                      html  
    cocorresp-package                       html  
    coinertia                               html  
    coinertiaI                              html  
    corAxis                                 html  
    crossval                                html  
    envfit.coca                             html  
    finding level-2 HTML links ... done

    fitCoinertia                            html  
    fitted.symcoca                          html  
    mcChi                                   html  
    permutest.coca                          html  
    plot.predcoca                           html  
    plot.symcoca                            html  
    points.coca                             html  
    rescale                                 html  
    resid.symcoca                           html  
    scaleChi                                html  
    scores.predcoca                         html  
    screeplot.symcoca                       html  
    simpls                                  html  
    summary.predcoca                        html  
    weights                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (cocorresp)
Making 'packages.html' ... done