dendextendRcpp

Package: dendextendRcpp
Type: Package
Title: Faster Dendrogram Manipulation using 'Rcpp'
Version: 0.6.1
Date: 2015-05-22
Authors@R: c(person("Tal", "Galili", role = c("aut", "cre", "cph"), email =
"tal.galili@gmail.com", comment = "http://www.r-statistics.com"),
person("Romain", "Francois", role = "ctb"), person("Dirk", "Eddelbuettel",
role = "ctb"), person("Kevin", "Ushey", role = "ctb"),
person("Yoav", "Benjamini", role = "ths"))
Description: Offers faster manipulation of dendrogram objects in
R. A dendrogram object in R is a list structure with attributes in its
nodes and leaves. Working with dendrogram objects often require a function
to recursively go through all (or most) element in the list object.
Naturally, such function are rather slow in R, but can become much faster
thanks to 'Rcpp'.
License: GPL-2 | GPL-3
URL: https://github.com/talgalili/dendextendRcpp/,
http://cran.r-project.org/web/packages/dendextendRcpp/
BugReports: https://github.com/talgalili/dendextendRcpp/issues
Depends: R (>= 3.0.0), Rcpp (>= 0.11.0), dendextend (>= 0.14.0)
Suggests: testthat, microbenchmark
LinkingTo: Rcpp
Packaged: 2015-05-22 18:15:52 UTC; junior
Author: Tal Galili [aut, cre, cph] (http://www.r-statistics.com),
Romain Francois [ctb],
Dirk Eddelbuettel [ctb],
Kevin Ushey [ctb],
Yoav Benjamini [ths]
Maintainer: Tal Galili <tal.galili@gmail.com>
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-05-22 20:21:16

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'dendextendRcpp' ...
** package 'dendextendRcpp' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c cut_lower.cpp -o cut_lower.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c get_branches_heights.cpp -o get_branches_heights.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c heights_per_k.cpp -o heights_per_k.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c is_functions.cpp -o is_functions.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c labels_dendrogram.cpp -o labels_dendrogram.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o dendextendRcpp.so RcppExports.o cut_lower.o get_branches_heights.o heights_per_k.o is_functions.o labels_dendrogram.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/dendextendRcpp/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'dendextendRcpp'
    finding HTML links ... done
    dendextendRcpp-package                  html  
    dendextendRcpp_cut_lower_fun            html  
Rd warning: /tmp/RtmpaQf7Tm/R.INSTALL2d193a2e9d16/dendextendRcpp/man/dendextendRcpp_cut_lower_fun.Rd:30: missing file link 'cutree.dendrogram'
Rd warning: /tmp/RtmpaQf7Tm/R.INSTALL2d193a2e9d16/dendextendRcpp/man/dendextendRcpp_cut_lower_fun.Rd:61: missing file link 'cutree'
    dendextendRcpp_get_branches_heights     html  
    dendextendRcpp_heights_per_k.dendrogram
                                            html  
    dendextendRcpp_labels.dendrogram        html  
** building package indices
** testing if installed package can be loaded
* DONE (dendextendRcpp)
Making 'packages.html' ... done