ensemblVEP

Package: ensemblVEP
Version: 1.12.0
Title: R Interface to Ensembl Variant Effect Predictor
Author: Valerie Obenchain
Maintainer: Bioconductor Package Maintainer <maintainer@bioconductor.org>
Depends: methods, BiocGenerics, GenomicRanges, VariantAnnotation
Imports: S4Vectors (>= 0.9.25), Biostrings, SummarizedExperiment
Suggests: RUnit
Description: Query the Ensembl Variant Effect Predictor via the perl API
SystemRequirements: Ensembl VEP (API version 84) and the Perl package
DBD::mysql must be installed. See the package README and
Ensembl web site,
http://www.ensembl.org/info/docs/tools/vep/index.html for
installation instructions.
License: Artistic-2.0
LazyLoad: yes
biocViews: Annotation, VariantAnnotation, SNP
NeedsCompilation: no
Packaged: 2016-05-04 04:49:45 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ensemblVEP' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'ensemblVEP'
    finding HTML links ... done
    VEPParam-class                          html  
    ensemblVEP                              html  
    finding level-2 HTML links ... done

    parseCSQToGRanges                       html  
    runtimeOptions                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ensemblVEP)
Making 'packages.html' ... done