enviPat

Package: enviPat
Type: Package
Title: Isotope Pattern, Profile and Centroid Calculation for Mass
Spectrometry
Version: 2.1
Date: 2016-03-14
Author: Martin Loos, Christian Gerber
Maintainer: Martin Loos <martin.loos@alumni.ethz.ch>
Description: Fast and very memory-efficient calculation of isotope patterns,
subsequent convolution to theoretical envelopes (profiles) plus valley
detection and centroidization or intensoid calculation. Batch processing,
resolution interpolation, wrapper, adduct calculations and molecular
formula parsing.
License: GPL-2
URL: http://www.envipat.eawag.ch/
http://pubs.acs.org/doi/abs/10.1021/acs.analchem.5b00941
NeedsCompilation: yes
Packaged: 2016-03-14 14:52:36 UTC; uchemadmin
Repository: CRAN
Date/Publication: 2016-03-14 16:27:00

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'enviPat' ...
** package 'enviPat' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c combination.c -o combination.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c element.c -o element.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c isotope.c -o isotope.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c main.c -o main.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c parse.c -o parse.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c peak.c -o peak.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c profile.c -o profile.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o enviPat.so combination.o element.o isotope.o main.o parse.o peak.o profile.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/enviPat/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'enviPat'
    finding HTML links ... done
    adducts                                 html  
    check_chemform                          html  
    check_ded                               html  
    check_several                           html  
    chemforms                               html  
    envelope                                html  
    enviPat-package                         html  
    getR                                    html  
    isopattern                              html  
    isotopes                                html  
    isowrap                                 html  
    mergeform                               html  
    multiform                               html  
    resolution_list                         html  
    subform                                 html  
    vdetect                                 html  
** building package indices
** testing if installed package can be loaded
* DONE (enviPat)
Making 'packages.html' ... done