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Last data update: 2014.03.03

ergm

Package: ergm
Version: 3.6.0
Date: 2016-03-24
Title: Fit, Simulate and Diagnose Exponential-Family Models for
Networks
Authors@R: c(
person("Mark S.", "Handcock", role=c("aut"), email="handcock@stat.ucla.edu"),
person("David R.", "Hunter", role=c("aut"), email="dhunter@stat.psu.edu"),
person("Carter T.", "Butts", role=c("aut"), email="buttsc@uci.edu"),
person("Steven M.", "Goodreau", role=c("aut"), email="goodreau@u.washington.edu"),
person("Pavel N.", "Krivitsky", role=c("aut","cre"), email="pavel@uow.edu.au"),
person("Martina", "Morris", role=c("aut"), email="morrism@u.washington.edu"),
person("Li","Wang",role=c("ctb"),email="lxwang@gmail.com"),
person("Kirk","Li",role=c("ctb"),email="kirkli@uw.edu"),
person("Skye", "Bender-deMoll", role=c("ctb"), email="skyebend@uw.edu"))
Depends: statnet.common (>= 3.3), network (>= 1.13)
Imports: robustbase (>= 0.9-10), coda (>= 0.18-1), trust, Matrix,
lpSolve, parallel, methods, MASS
Suggests: lattice, latticeExtra, sna, latentnet, rmarkdown,
ergm.userterms, tergm, Rmpi
Description: An integrated set of tools to analyze and simulate networks based on exponential-family random graph models (ERGM). "ergm" is a part of the "statnet" suite of packages for network analysis.
License: GPL-3 + file LICENSE
URL: http://statnet.org
VignetteBuilder: rmarkdown
NeedsCompilation: yes
Packaged: 2016-03-24 05:55:47 UTC; pavel
Author: Mark S. Handcock [aut],
David R. Hunter [aut],
Carter T. Butts [aut],
Steven M. Goodreau [aut],
Pavel N. Krivitsky [aut, cre],
Martina Morris [aut],
Li Wang [ctb],
Kirk Li [ctb],
Skye Bender-deMoll [ctb]
Maintainer: Pavel N. Krivitsky <pavel@uow.edu.au>
Repository: CRAN
Date/Publication: 2016-03-25 09:12:20

● Cran Task View: gR
● 0 images, 73 functions, 13 datasets
● Reverse Depends: 15

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ergm' ...
** package 'ergm' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c CD.c -o CD.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MCMC.c -o MCMC.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MHproposal.c -o MHproposal.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MHproposals.c -o MHproposals.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MHproposals_bipartite.c -o MHproposals_bipartite.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MHproposals_block.c -o MHproposals_block.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MHproposals_degree.c -o MHproposals_degree.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MPLE.c -o MPLE.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c MPLEconddeg.c -o MPLEconddeg.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c SAN.c -o SAN.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c allstatistics.c -o allstatistics.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c changestat.c -o changestat.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c changestats.c -o changestats.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c changestats.dgw_sp.c -o changestats.dgw_sp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c changestats_coincidence.c -o changestats_coincidence.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c changestats_concurrentties.c -o changestats_concurrentties.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c changestats_experimental.c -o changestats_experimental.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c changestats_homoproportion.c -o changestats_homoproportion.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c changestats_indices.c -o changestats_indices.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c changestats_internal.c -o changestats_internal.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c changestats_transitiveties.c -o changestats_transitiveties.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c conddegmple.c -o conddegmple.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c edgelist.c -o edgelist.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c edgetree.c -o edgetree.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c geodist.c -o geodist.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c model.c -o model.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c netstats.c -o netstats.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c wtCD.c -o wtCD.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c wtMCMC.c -o wtMCMC.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c wtMHproposal.c -o wtMHproposal.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c wtMHproposals.c -o wtMHproposals.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c wtSAN.c -o wtSAN.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c wtchangestats.c -o wtchangestats.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c wtedgetree.c -o wtedgetree.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c wtmodel.c -o wtmodel.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c wtnetstats.c -o wtnetstats.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o ergm.so CD.o MCMC.o MHproposal.o MHproposals.o MHproposals_bipartite.o MHproposals_block.o MHproposals_degree.o MPLE.o MPLEconddeg.o SAN.o allstatistics.o changestat.o changestats.o changestats.dgw_sp.o changestats_coincidence.o changestats_concurrentties.o changestats_experimental.o changestats_homoproportion.o changestats_indices.o changestats_internal.o changestats_transitiveties.o conddegmple.o edgelist.o edgetree.o geodist.o model.o netstats.o wtCD.o wtMCMC.o wtMHproposal.o wtMHproposals.o wtSAN.o wtchangestats.o wtedgetree.o wtmodel.o wtnetstats.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/ergm/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'ergm'
    finding HTML links ... done
    Getting.Started                         html  
    MHproposal                              html  
    anova.ergm                              html  
    approx.hotelling.diff.test              html  
    as.edgelist                             html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/as.edgelist.Rd:31: missing file link 'as.matrix.network.edgelist'
    as.network.numeric                      html  
    check.ErgmTerm                          html  
    coef.ergm                               html  
    coef.length.model                       html  
    control.ergm                            html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/control.ergm.Rd:542: missing file link 'set.seed'
    control.ergm.bridge                     html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/control.ergm.bridge.Rd:81: missing file link 'set.seed'
    control.gof                             html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/control.gof.Rd:98: missing file link 'set.seed'
    control.logLik.ergm                     html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/control.logLik.ergm.Rd:84: missing file link 'set.seed'
    control.san                             html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/control.san.Rd:95: missing file link 'set.seed'
    control.simulate.ergm                   html  
    degreedist                              html  
    ecoli                                   html  
    enformulate.curved                      html  
    ergm-MetropolisHastingsProposals        html  
    ergm-constraints                        html  
    ergm-internal                           html  
    ergm-package                            html  
    ergm-parallel                           html  
    ergm-references                         html  
    ergm-terms                              html  
    finding level-2 HTML links ... done

    ergm.ConstraintImplication              html  
    ergm.Cprepare                           html  
    ergm.MHP.table                          html  
    ergm                                    html  
    ergm.allstats                           html  
    ergm.bounddeg                           html  
    ergm.bridge.dindstart.llk               html  
    ergm.bridge.llr                         html  
    ergm.degeneracy                         html  
    ergm.eta                                html  
    ergm.exact                              html  
    ergm.geodistdist                        html  
    ergm.getMCMCsample                      html  
    ergm.getglobalstats                     html  
    ergm.init.methods                       html  
    ergm.mple                               html  
    ergmMPLE                                html  
    ergm_deprecated                         html  
    ergm_formula_utils                      html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/ergm_formula_utils.Rd:72: missing file link 'nonsimp.update.formula'
    eut-upgrade                             html  
    faux.desert.high                        html  
    faux.dixon.high                         html  
    faux.magnolia.high                      html  
    faux.mesa.high                          html  
    fix.curved                              html  
    flobusiness                             html  
    flomarriage                             html  
    florentine                              html  
    g4                                      html  
    get.free.dyads                          html  
    get.node.attr                           html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/get.node.attr.Rd:38: missing file link 'get.vertex.attribute'
    gof.ergm                                html  
    is.curved                               html  
    is.durational                           html  
    is.dyad.independent                     html  
    is.inCH                                 html  
    kapferer                                html  
    lasttoggle                              html  
    logLik.ergm                             html  
    mcmc.diagnostics.ergm                   html  
    mcmc.list_utils                         html  
    molecule                                html  
    network.update                          html  
    newnw.extract                           html  
    nvattr.copy.network                     html  
    plot.ergm                               html  
    plot.gofobject                          html  
    plot.network.ergm                       html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/plot.network.ergm.Rd:20: missing file link 'latentnet'
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/plot.network.ergm.Rd:88: missing file link 'network.vertex.names'
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/plot.network.ergm.Rd:139: missing file link 'set.seed'
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/plot.network.ergm.Rd:144: missing file link 'latentnet'
    print.ergm                              html  
    samplk                                  html  
    sampson                                 html  
    san                                     html  
    search.ergmTerms                        html  
    simulate.ergm                           html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/simulate.ergm.Rd:64: missing file link 'set.seed'
    standardize.network                     html  
    summary.ergm                            html  
    summary.gofobject                       html  
    summary.network.list                    html  
Rd warning: /tmp/RtmpYKhlR7/R.INSTALL50e61574a036/ergm/man/summary.network.list.Rd:47: missing file link 'summary.network'
    summary.statistics                      html  
    vcov.ergm                               html  
    wtd.median                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ergm)
Making 'packages.html' ... done