gaga

Package: gaga
Version: 2.18.0
Date: 2015-06-14
Title: GaGa hierarchical model for high-throughput data analysis
Author: David Rossell <rosselldavid@gmail.com>.
Maintainer: David Rossell <rosselldavid@gmail.com>
Depends: R (>= 2.8.0), Biobase, coda, EBarrays, mgcv
Enhances: parallel
Description: Implements the GaGa model for high-throughput data
analysis, including differential expression analysis,
supervised gene clustering and classification. Additionally, it
performs sequential sample size calculations using the GaGa and
LNNGV models (the latter from EBarrays package).
License: GPL (>= 2)
biocViews: OneChannel, MassSpectrometry, MultipleComparison,
DifferentialExpression, Classification
NeedsCompilation: yes
Packaged: 2016-05-04 03:05:17 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'gaga' ...
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c cseqdesma.c -o cseqdesma.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c cstat.c -o cstat.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o gaga.so cseqdesma.o cstat.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/gaga/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'gaga'
    finding HTML links ... done
    buildPatterns                           html  
    checkfit                                html  
    classpred                               html  
    dcgamma                                 html  
    findgenes                               html  
    fitGG                                   html  
    forwsimDiffExpr                         html  
    geneclus                                html  
    getpar                                  html  
    parest                                  html  
    plotForwSim                             html  
    posmeansGG                              html  
    powclasspred                            html  
    powfindgenes                            html  
    print.gagaclus                          html  
    print.gagafit                           html  
    print.gagahyp                           html  
    seqBoundariesGrid                       html  
    simGG                                   html  
    simnewsamples                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (gaga)
Making 'packages.html' ... done