Last data update: 2014.03.03
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ind1KG
Package: ind1KG
Title: Data from 1000 Genomes, NA19240 (female) chr6 excerpt
Version: 0.9.0
Author: VJ Carey <stvjc@channing.harvard.edu>
Maintainer: VJ Carey <stvjc@channing.harvard.edu>
Description: Elements of samtools/bioc workflow for dealing with personal sequence
focusing on identification and interpretation of rare variants
Depends: R (>= 2.10.1), chopsticks
Suggests: Rsamtools, rtracklayer, GenomicFeatures, org.Hs.eg.db,
SNPlocs.Hsapiens.dbSNP.20090506,
TxDb.Hsapiens.UCSC.hg18.knownGene, lumiHumanIDMapping, GGBase,
GGtools, hmyriB36
License: Artistic-2.0
biocViews: Genome, MicroarrayData, SNPData
NeedsCompilation: no
Packaged: 2015-10-15 16:43:20 UTC; biocbuild
● BiocViews: Genome, MicroarrayData, SNPData
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0 images,
0 functions,
8 datasets
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Reverse Depends: 0
Install log
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ind1KG' ...
** data
** inst
** help
*** installing help indices
converting help for package 'ind1KG'
finding HTML links ... done
c6snp html
gw6c6.snp240 html
n240 html
oregdf html
pup240_500k html
pup240_disc html
rsgdf html
yri240_6 html
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ind1KG)
Making 'packages.html' ... done
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