Last data update: 2014.03.03


Package: ind1KG
Title: Data from 1000 Genomes, NA19240 (female) chr6 excerpt
Version: 0.9.0
Author: VJ Carey <>
Maintainer: VJ Carey <>
Description: Elements of samtools/bioc workflow for dealing with personal sequence
focusing on identification and interpretation of rare variants
Depends: R (>= 2.10.1), chopsticks
Suggests: Rsamtools, rtracklayer, GenomicFeatures,,
TxDb.Hsapiens.UCSC.hg18.knownGene, lumiHumanIDMapping, GGBase,
GGtools, hmyriB36
License: Artistic-2.0
biocViews: Genome, MicroarrayData, SNPData
NeedsCompilation: no
Packaged: 2015-10-15 16:43:20 UTC; biocbuild

● BiocViews: Genome, MicroarrayData, SNPData
● 0 images, 0 functions, 8 datasets
● Reverse Depends: 0

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ind1KG' ...
** data
** inst
** help
*** installing help indices
  converting help for package 'ind1KG'
    finding HTML links ... done
    c6snp                                   html  
    gw6c6.snp240                            html  
    n240                                    html  
    oregdf                                  html  
    pup240_500k                             html  
    pup240_disc                             html  
    rsgdf                                   html  
    yri240_6                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ind1KG)
Making 'packages.html' ... done