iterpc

Package: iterpc
Type: Package
Title: Efficient Iterator for Permutations and Combinations
Version: 0.3.0
Date: 2016-4-20
Author: Randy Lai [aut, cre], Martin Broadhurst [aut]
Maintainer: Randy Lai <randy.cs.lai@gmail.com>
Description: A collection of iterators for generating permutations and combinations with or
without replacement; with distinct items or non-distinct items (multiset).
The generated sequences are in lexicographical order (dictionary order). The
algorithms to generate permutations and combinations are memory efficient. These
iterative algorithms enable users to process all sequences without putting all
results in the memory at the same time. The algorithms are written in C/C++ for
faster performances.
URL: http://randy3k.github.io/iterpc
License: GPL-2
Depends: R (>= 3.0.0)
Imports: iterators, gmp (>= 0.5-12), Rcpp (>= 0.11.0)
Suggests: foreach, testthat
LinkingTo: Rcpp
SystemRequirements: GNU make
NeedsCompilation: yes
ByteCompile: yes
RoxygenNote: 5.0.1
Packaged: 2016-05-31 03:25:44 UTC; randy
Repository: CRAN
Date/Publication: 2016-05-31 07:49:57

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'iterpc' ...
** package 'iterpc' successfully unpacked and MD5 sums checked
** libs
make[1]: Entering directory '/tmp/RtmpWL3bZi/R.INSTALL47221e50a330/iterpc/src/mbcomb'
rm -f libmbcomb.a Examples/permutations-elements Examples/k-permutations Examples/subsets Examples/multiset-combinations-elements Examples/partitions Examples/multiset-subsets-elements Examples/multiset-combinations Examples/subset-subsets Examples/n-tuples Examples/permutations Examples/k-permutations-elements Examples/multiset-subsets Examples/combinations-elements Examples/subsets-elements Examples/partitions-elements Examples/combinations Examples/multicombinations
rm -f Src/k-permutation.o Src/comb-util.o Src/combination.o Src/partition.o Src/permutation.o Src/subset.o Src/multiset-combination.o Src/subset-subset.o Src/multicombination.o Src/n-tuple.o Src/multiset-subset.o
rm -f 
make[1]: Leaving directory '/tmp/RtmpWL3bZi/R.INSTALL47221e50a330/iterpc/src/mbcomb'
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c utils/k-permutation.c -o utils/k-permutation.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c combination.cpp -o combination.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c permutation.cpp -o permutation.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c RcppExports.cpp -o RcppExports.o
make[1]: Entering directory '/tmp/RtmpWL3bZi/R.INSTALL47221e50a330/iterpc/src/mbcomb'
gcc -g -O2  -fpic -I Include -c Src/k-permutation.c -o Src/k-permutation.o
gcc -g -O2  -fpic -I Include -c Src/comb-util.c -o Src/comb-util.o
gcc -g -O2  -fpic -I Include -c Src/combination.c -o Src/combination.o
gcc -g -O2  -fpic -I Include -c Src/partition.c -o Src/partition.o
gcc -g -O2  -fpic -I Include -c Src/permutation.c -o Src/permutation.o
gcc -g -O2  -fpic -I Include -c Src/subset.c -o Src/subset.o
gcc -g -O2  -fpic -I Include -c Src/multiset-combination.c -o Src/multiset-combination.o
gcc -g -O2  -fpic -I Include -c Src/subset-subset.c -o Src/subset-subset.o
gcc -g -O2  -fpic -I Include -c Src/multicombination.c -o Src/multicombination.o
gcc -g -O2  -fpic -I Include -c Src/n-tuple.c -o Src/n-tuple.o
gcc -g -O2  -fpic -I Include -c Src/multiset-subset.c -o Src/multiset-subset.o
ar -rcs libmbcomb.a Src/k-permutation.o Src/comb-util.o Src/combination.o Src/partition.o Src/permutation.o Src/subset.o Src/multiset-combination.o Src/subset-subset.o Src/multicombination.o Src/n-tuple.o Src/multiset-subset.o
make[1]: Leaving directory '/tmp/RtmpWL3bZi/R.INSTALL47221e50a330/iterpc/src/mbcomb'
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o iterpc.so utils/k-permutation.o combination.o permutation.o RcppExports.o -Lmbcomb -lmbcomb -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/iterpc/libs
** R
** demo
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'iterpc'
    finding HTML links ... done
    getall                                  html  
    getcurrent                              html  
    getlength                               html  
    getnext                                 html  
    iter_wrapper                            html  
    iterpc                                  html  
    multichoose                             html  
    nc_multiset                             html  
    np_multiset                             html  
** building package indices
** testing if installed package can be loaded
* DONE (iterpc)
Making 'packages.html' ... done