les

Package: les
Type: Package
Title: Identifying Differential Effects in Tiling Microarray Data
Version: 1.22.0
Author: Julian Gehring, Clemens Kreutz, Jens Timmer
Maintainer: Julian Gehring <jg-bioc@gmx.com>
Imports: boot, gplots, RColorBrewer
Depends: R (>= 2.13.2), methods, graphics, fdrtool
Suggests: Biobase, limma
Enhances: parallel
Description: The 'les' package estimates Loci of Enhanced Significance
(LES) in tiling microarray data. These are regions of
regulation such as found in differential transcription,
CHiP-chip, or DNA modification analysis. The package provides a
universal framework suitable for identifying differential
effects in tiling microarray data sets, and is independent of
the underlying statistics at the level of single probes.
License: GPL-3
LazyLoad: yes
biocViews: Microarray, DifferentialExpression, ChIPchip,
DNAMethylation, Transcription
NeedsCompilation: no
Packaged: 2016-05-04 03:44:29 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'les' ...
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for 'plot' from package 'graphics' in package 'les'
Creating a generic function for 'summary' from package 'base' in package 'les'
** help
*** installing help indices
  converting help for package 'les'
    finding HTML links ... done
    Les-class                               html  
    Les                                     html  
    chi2                                    html  
    ci                                      html  
    estimate                                html  
    export                                  html  
    les-internal                            html  
    les-package                             html  
    plot                                    html  
    regions                                 html  
    spikeInData                             html  
    spikeInStat                             html  
    threshold                               html  
    weighting                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (les)
Making 'packages.html' ... done