lpSolve

Package: lpSolve
Version: 5.6.13
Date: 2015-09-18
Title: Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs
Author: Michel Berkelaar and others
Maintainer: Samuel E. Buttrey <buttrey@nps.edu>
Description: Lp_solve is freely available (under LGPL 2) software for
solving linear, integer and mixed integer programs. In this
implementation we supply a "wrapper" function in C and some R
functions that solve general linear/integer problems,
assignment problems, and transportation problems. This version
calls lp_solve version 5.5.
License: LGPL-2
NeedsCompilation: yes
Packaged: 2015-09-18 22:53:52 UTC; sebuttre
Repository: CRAN
Date/Publication: 2015-09-19 10:00:23

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'lpSolve' ...
** package 'lpSolve' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c colamd.c -o colamd.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c commonlib.c -o commonlib.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c hbio.c -o hbio.o
hbio.c: In function 'readHB_header':
hbio.c:303:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, BUFSIZ, in_file);
     ^
hbio.c:311:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, BUFSIZ, in_file);
     ^
hbio.c:321:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, BUFSIZ, in_file);
     ^
hbio.c:333:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, BUFSIZ, in_file);
     ^
hbio.c:351:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
        fgets(line, BUFSIZ, in_file);
        ^
hbio.c: In function 'readHB_mat_double':
hbio.c:424:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
        fgets(line, BUFSIZ, in_file);
        ^
hbio.c:447:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
        fgets(line, BUFSIZ, in_file);
        ^
hbio.c:476:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
        fgets(line, BUFSIZ, in_file);
        ^
hbio.c: In function 'readHB_aux_double':
hbio.c:627:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, BUFSIZ, in_file);
       ^
hbio.c:638:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, BUFSIZ, in_file);
     ^
hbio.c:645:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
            fgets(line, BUFSIZ, in_file);
            ^
hbio.c:665:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
            fgets(line, BUFSIZ, in_file);
            ^
hbio.c:693:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
            fgets(line, BUFSIZ, in_file);
            ^
hbio.c: In function 'readHB_mat_char':
hbio.c:978:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
        fgets(line, BUFSIZ, in_file);
        ^
hbio.c:1001:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
        fgets(line, BUFSIZ, in_file);
        ^
hbio.c:1029:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
        fgets(line, BUFSIZ, in_file);
        ^
hbio.c: In function 'readHB_aux_char':
hbio.c:1193:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, BUFSIZ, in_file);
       ^
hbio.c:1204:5: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, BUFSIZ, in_file);
     ^
hbio.c:1214:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
            fgets(line, BUFSIZ, in_file);
            ^
hbio.c:1232:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
            fgets(line, BUFSIZ, in_file);
            ^
hbio.c:1263:12: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
            fgets(line, BUFSIZ, in_file);
            ^
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c ini.c -o ini.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c isfixedvar.c -o isfixedvar.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_Hash.c -o lp_Hash.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_LUSOL.c -o lp_LUSOL.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_MDO.c -o lp_MDO.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_MPS.c -o lp_MPS.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_SOS.c -o lp_SOS.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_crash.c -o lp_crash.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_lib.c -o lp_lib.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_matrix.c -o lp_matrix.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_mipbb.c -o lp_mipbb.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_params.c -o lp_params.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_presolve.c -o lp_presolve.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_price.c -o lp_price.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_pricePSE.c -o lp_pricePSE.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_report.c -o lp_report.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_rlp.c -o lp_rlp.o
In file included from lp_rlp.c:97:0:
lp_rlp.h: In function 'lp_yy_fatal_error':
lp_rlp.h:1804:19: warning: passing argument 1 of 'lex_fatal_error' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
  lex_fatal_error (msg); /* exit( YY_EXIT_FAILURE ); */
                   ^
In file included from lp_rlp.c:32:0:
yacc_read.h:6:6: note: expected 'char *' but argument is of type 'const char *'
 void lex_fatal_error(char *msg);
      ^
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_scale.c -o lp_scale.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_simplex.c -o lp_simplex.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_utils.c -o lp_utils.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lp_wlp.c -o lp_wlp.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lpslink56.c -o lpslink56.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lusol.c -o lusol.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c lusolio.c -o lusolio.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c mmio.c -o mmio.o
mmio.c: In function 'mm_read_unsymmetric_sparse':
mmio.c:79:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
         fscanf(f, "%d %d %lg\n", &I[i], &J[i], &val[i]);
         ^
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c myblas.c -o myblas.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c sparselib.c -o sparselib.o
sparselib.c: In function 'resizeMatrix':
sparselib.c:51:3: warning: ignoring return value of 'realloc', declared with attribute warn_unused_result [-Wunused-result]
   realloc ((void *) matrix->list, sizeof(sparseVector) * newSize);
   ^
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I . -DINTEGERTIME -DPARSER_LP -DBUILDING_FOR_R -DYY_NEVER_INTERACTIVE -DUSRDLL -DCLOCKTIME -DRoleIsExternalInvEngine -DINVERSE_ACTIVE=INVERSE_LUSOL -DINLINE=static -DParanoia -I/usr/local/include    -fpic  -g -O2  -c yacc_read.c -o yacc_read.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o lpSolve.so colamd.o commonlib.o hbio.o ini.o isfixedvar.o lp_Hash.o lp_LUSOL.o lp_MDO.o lp_MPS.o lp_SOS.o lp_crash.o lp_lib.o lp_matrix.o lp_mipbb.o lp_params.o lp_presolve.o lp_price.o lp_pricePSE.o lp_report.o lp_rlp.o lp_scale.o lp_simplex.o lp_utils.o lp_wlp.o lpslink56.o lusol.o lusolio.o mmio.o myblas.o sparselib.o yacc_read.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/lpSolve/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'lpSolve'
    finding HTML links ... done
    lp                                      html  
    lp.assign                               html  
    lp.object                               html  
    lp.transport                            html  
    make.q8                                 html  
    print.lp                                html  
** building package indices
** testing if installed package can be loaded
* DONE (lpSolve)
Making 'packages.html' ... done