mRMRe

Package: mRMRe
Type: Package
Title: R package for parallelized mRMR ensemble feature selection
Version: 2.0.5
Date: 2014-08-119
Author: Nicolas De Jay, Simon Papillon-Cavanagh, Catharina Olsen, Gianluca Bontempi, Benjamin Haibe-Kains
Maintainer: Benjamin Haibe-Kains <benjamin.haibe.kains@utoronto.ca>
Description: This package contains a set of function to compute mutual information matrices from continuous, categorical and survival variables. It also contains function to perform feature selection with mRMR and a new ensemble mRMR technique.
License: Artistic-2.0
Depends: R (>= 2.10), survival, igraph, methods
URL: http://www.pmgenomics.ca/bhklab/
Packaged: 2015-03-21 18:45:53 UTC; hornik
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-03-21 19:47:33

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'mRMRe' ...
** package 'mRMRe' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -fopenmp -g -I/usr/local/include    -fpic  -g -O2  -c Data.cpp -o Data.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -fopenmp -g -I/usr/local/include    -fpic  -g -O2  -c Filter.cpp -o Filter.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -fopenmp -g -I/usr/local/include    -fpic  -g -O2  -c Math.cpp -o Math.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -fopenmp -g -I/usr/local/include    -fpic  -g -O2  -c Matrix.cpp -o Matrix.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -fopenmp -g -I/usr/local/include    -fpic  -g -O2  -c MutualInformationMatrix.cpp -o MutualInformationMatrix.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -fopenmp -g -I/usr/local/include    -fpic  -g -O2  -c exports.cpp -o exports.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o mRMRe.so Data.o Filter.o Math.o Matrix.o MutualInformationMatrix.o exports.o -fopenmp -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/mRMRe/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'mRMRe'
    finding HTML links ... done
    adjacencyMatrix                         html  
    causality                               html  
    cgps                                    html  
    correlate                               html  
    featureCount                            html  
    featureData                             html  
    featureNames                            html  
    get.thread.count                        html  
    mRMRe.Data-class                        html  
    mRMRe.Filter-class                      html  
    mRMRe.Network-class                     html  
    mim                                     html  
    priors                                  html  
    sampleCount                             html  
    sampleNames                             html  
    sampleStrata                            html  
    sampleWeights                           html  
    scores                                  html  
    set.thread.count                        html  
    solutions                               html  
    subsetData                              html  
    target                                  html  
    visualize                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (mRMRe)
Making 'packages.html' ... done