matchBox

Package: matchBox
Type: Package
Title: Utilities to compute, compare, and plot the agreement between
ordered vectors of features (ie. distinct genomic experiments).
The package includes Correspondence-At-the-TOP (CAT) analysis.
Version: 1.14.0
Date: 2012-08-23
Author: Luigi Marchionni <marchion@jhu.edu>, Anuj Gupta <agupta52@jhu.edu>
Maintainer: Luigi Marchionni <marchion@jhu.edu>, Anuj Gupta <agupta52@jhu.edu>
Depends: R (>= 2.8.0)
Imports:
Suggests:
Description: The matchBox package enables comparing ranked vectors of
features, merging multiple datasets, removing redundant
features, using CAT-plots and Venn diagrams, and computing
statistical significance.
License: Artistic-2.0
LazyLoad: yes
biocViews: Software, Annotation, Microarray, MultipleComparison,
Visualization
NeedsCompilation: no
Packaged: 2016-05-04 04:46:03 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'matchBox' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'matchBox'
    finding HTML links ... done
    calcHypPI                               html  
Rd warning: /tmp/RtmpIBjKqA/R.INSTALL4e6634ff5f1c/matchBox/man/calcHypPI.Rd:96: missing file link 'qhyper'
    computeCat                              html  
    filterRedundant                         html  
    matchBox-package                        html  
    matchBoxExpression                      html  
    mergeData                               html  
    plotCat                                 html  
Rd warning: /tmp/RtmpIBjKqA/R.INSTALL4e6634ff5f1c/matchBox/man/plotCat.Rd:125: missing file link 'rainbow'
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (matchBox)
Making 'packages.html' ... done