medicalrisk

Package: medicalrisk
Type: Package
Title: Medical Risk and Comorbidity Tools for ICD-9-CM Data
Version: 1.2
Date: 2016-01-23
Authors@R: c(person("Patrick", "McCormick", role = c("aut", "cre"),
email = "patrick.mccormick@alum.mit.edu"),
person("Thomas", "Joseph", role = "aut",
email = "thomas.joseph@mountsinai.org"))
Description: Generates risk estimates and comorbidity flags from ICD-9-CM
codes available in administrative medical datasets. The package supports
the Charlson Comorbidity Index, the Elixhauser Comorbidity
classification, the Revised Cardiac Risk Index, and the Risk Stratification
Index. Methods are table-based, fast, and use the 'plyr' package, so
parallelization is possible for large jobs. Also includes a sample of
real ICD-9 data for 100 patients from a publicly available dataset.
Depends: R (>= 3.0.0)
Imports: plyr (>= 1.5), reshape2, hash
Suggests: testthat, knitr, ggplot2, gridExtra
License: GPL-3 | file LICENSE
LazyData: true
VignetteBuilder: knitr
RoxygenNote: 5.0.1
BugReports: https://github.com/patrickmdnet/medicalrisk/issues
URL: https://github.com/patrickmdnet/medicalrisk
NeedsCompilation: no
Packaged: 2016-01-24 00:23:59 UTC; Patrick
Author: Patrick McCormick [aut, cre],
Thomas Joseph [aut]
Maintainer: Patrick McCormick <patrick.mccormick@alum.mit.edu>
Repository: CRAN
Date/Publication: 2016-01-24 15:45:31

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'medicalrisk' ...
** package 'medicalrisk' successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'medicalrisk'
    finding HTML links ... done
    charlson_list                           html  
    charlson_weights                        html  
    charlson_weights_orig                   html  
    elixhauser_list                         html  
    generate_charlson_index_df              html  
    generate_comorbidity_df                 html  
    finding level-2 HTML links ... done

    icd9cm_charlson_deyo                    html  
    icd9cm_charlson_quan                    html  
    icd9cm_charlson_romano                  html  
    icd9cm_elixhauser_ahrq37                html  
    icd9cm_elixhauser_quan                  html  
    icd9cm_list                             html  
    icd9cm_rcri                             html  
    icd9cm_sessler_rsi                      html  
    melt_icd9list                           html  
    merge_icd9_dx_and_procs                 html  
    rsi_beta_1yrpod                         html  
    rsi_beta_30dlos                         html  
    rsi_beta_30dpod                         html  
    rsi_beta_inhosp                         html  
    rsi_sample_data                         html  
    rsi_sample_results                      html  
    sessler_get_single_beta                 html  
    verify_sessler_rsi                      html  
    vt_inp_sample                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (medicalrisk)
Making 'packages.html' ... done