Last data update: 2014.03.03
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mets
Package: mets
Type: Package
Title: Analysis of Multivariate Event Times
Version: 1.1.1
Date: 2015-05-27
Author: Klaus K. Holst and Thomas Scheike
Maintainer: Klaus K. Holst <klaus@holst.it>
Description: Implementation of various statistical models for multivariate
event history data. Including multivariate cumulative incidence models, and
bivariate random effects probit models (Liability models). Also contains
two-stage binomial modelling that can do pairwise odds-ratio dependence
modelling based marginal logistic regression models. This is an alternative
to the alternating logistic regression approach (ALR).
License: GPL (>= 2)
LazyLoad: yes
URL: http://lava.r-forge.r-project.org/
Depends: R (>= 2.15), timereg (>= 1.8.9), lava (>= 1.4)
Imports: numDeriv, compiler, Rcpp, splines, survival
Suggests: lava.tobit (>= 0.4-7), prodlim, testthat, ucminf
LinkingTo: Rcpp, RcppArmadillo
NeedsCompilation: yes
Packaged: 2015-05-28 17:17:19 UTC; klaus
Repository: CRAN
Date/Publication: 2015-05-29 07:36:10
● Cran Task View: Survival
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0 images,
51 functions,
0 datasets
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Reverse Depends: 0
Install log
* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'mets' ...
** package 'mets' successfully unpacked and MD5 sums checked
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c aalenfrailty.cpp -o aalenfrailty.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c binomial-plackett.cpp -o binomial-plackett.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c biprobit.cpp -o biprobit.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c claytonoakes.cpp -o claytonoakes.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c clusterindex.cpp -o clusterindex.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c cor.cpp -o cor.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c fastcox.cpp -o fastcox.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c mvn.cpp -o mvn.o
f95 -fpic -g -O2 -c mvt.f -o mvt.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c plackettMLE.cpp -o plackettMLE.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c prop-odd.cpp -o prop-odd.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c randomF77.c -o randomF77.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c tools.cpp -o tools.o
f95 -fpic -g -O2 -c tvpack.f -o tvpack.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include" -I"/home/ddbj/local/lib64/R/library/RcppArmadillo/include" -fpic -g -O2 -c tvpackAux.c -o tvpackAux.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o mets.so RcppExports.o aalenfrailty.o binomial-plackett.o biprobit.o claytonoakes.o clusterindex.o cor.o fastcox.o mvn.o mvt.o plackettMLE.o prop-odd.o randomF77.o tools.o tvpack.o tvpackAux.o -L/home/ddbj/local/lib64/R/lib -lRlapack -L/home/ddbj/local/lib64/R/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/mets/libs
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'mets'
finding HTML links ... done
ClaytonOakes html
Dbvn html
Event html
Grandom.cif html
aalenfrailty html
back2timereg html
bicomprisk html
binomial.twostage html
biprobit html
blocksample html
bptwin html
casewise html
casewise.test html
concordance html
cor.cif html
dermalridges html
dermalridgesMZ html
divide.conquer html
divide.conquer.timereg html
easy.binomial.twostage html
easy.twostage html
eventpois html
fast.approx html
fast.pattern html
fast.reshape html
internal html
ipw html
ipw2 html
lifetable.matrix html
mena html
mets-package html
migr html
multcif html
np html
phreg html
plack.cif html
printcasewisetest html
prt html
random.cif html
simAalenFrailty html
simClaytonOakes html
simClaytonOakesWei html
summary.cor html
test.conc html
tetrachoric html
twin.clustertrunc html
twinbmi html
twinlm html
twinsim html
twinstut html
twostage html
** building package indices
** testing if installed package can be loaded
* DONE (mets)
Making 'packages.html' ... done
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